RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 C17orf75Q9HAS0 396 aa17.7■□□□□ 0.42
NECTIN1-202ENST00000340882 ZMYM5Q9UJ78 669 aa17.7■□□□□ 0.42
NECTIN1-202ENST00000340882 MAGED2Q9UNF1 606 aaPredicted RBP17.7■□□□□ 0.42
NECTIN1-202ENST00000340882 ATXN2Q99700 1313 aaKnown RBP17.7■□□□□ 0.42
NECTIN1-202ENST00000340882 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 FAM221BA6H8Z2 402 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 NFICP08651 508 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 PLS3P13797 630 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 OPRD1P41143 372 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 IL17AQ16552 155 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 GAB4Q2WGN9 574 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 ZC2HC1CQ53FD0 456 aaPredicted RBP17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 WSCD1Q658N2 575 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 C11orf74Q86VG3 221 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 TTC30AQ86WT1 665 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 SPPL2BQ8TCT7 592 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 FAM212AQ96EL1 285 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 SLC32A1Q9H598 525 aa17.69■□□□□ 0.42
NECTIN1-202ENST00000340882 NPHP3-ACAD11A0A0J9YXS1 232 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 CYB561D2O14569 222 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 CHRM1P11229 460 aaPredicted RBP17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 P2RY2P41231 377 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 MESP2Q0VG99 397 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 LMAN2Q12907 356 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 USP4Q13107 963 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 ORC2Q13416 577 aaPredicted RBP17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 PDIA5Q14554 519 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 CRY1Q16526 586 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 PDZD3Q86UT5 571 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 MRPS31Q92665 395 aaKnown RBP17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 PI4K2AQ9BTU6 479 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 NUSAP1Q9BXS6 441 aaKnown RBP17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 MMP17Q9ULZ9 603 aa17.68■□□□□ 0.42
NECTIN1-202ENST00000340882 XPOTO43592 962 aaKnown RBP17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 IFNAR2P48551 515 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 FAM160A1Q05DH4 1040 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 COL28A1Q2UY09 1125 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 OR2I1PQ8NGU4 316 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 LRRC15Q8TF66 581 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 C2orf15Q8WU43 125 aaKnown RBP17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 ATP2A3Q93084 1043 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 BICD1Q96G01 975 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 BBC3Q96PG8 261 aaPredicted RBP17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 PYM1Q9BRP8 204 aaKnown RBP17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 TRPC7Q9HCX4 862 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 PTPRBP23467 1997 aa17.67■□□□□ 0.42
NECTIN1-202ENST00000340882 TNFRSF10BO14763 440 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 OGTO15294 1046 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 ITPKAP23677 461 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 ZXDBP98169 803 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 SCAPQ12770 1279 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 DDR2Q16832 855 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 CCDC142Q17RM4 750 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 SLC39A4Q6P5W5 647 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 SLC23A3Q6PIS1 610 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 RAB44Q7Z6P3 723 aaPredicted RBP17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 SYT12Q8IV01 421 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 ARL14EPQ8N8R7 260 aaPredicted RBP17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 EXOC4Q96A65 974 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 ZDHHC4Q9NPG8 344 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 GCNT4Q9P109 453 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 CPSF3Q9UKF6 684 aaKnown RBP17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 PCDHB5Q9Y5E4 795 aa17.66■□□□□ 0.42
NECTIN1-202ENST00000340882 C2orf78A6NCI8 922 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 UPK3BL1B0FP48 263 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 UPK3BL2E5RIL1 263 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 PRPF40AO75400 957 aaKnown RBP17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 CSH1P0DML2 217 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 CSH2P0DML3 217 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 TOB1P50616 345 aaPredicted RBP17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 SMTNP53814 917 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 MAP7D1Q3KQU3 841 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 EMC10Q5UCC4 262 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 LPCAT2Q7L5N7 544 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 THEM5Q8N1Q8 247 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 ALLCQ8N6M5 410 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 PNMA5Q96PV4 448 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 PILRBQ9UKJ0 227 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 DSEQ9UL01 958 aa17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 FLNBO75369 2602 aaKnown RBP17.65■□□□□ 0.42
NECTIN1-202ENST00000340882 ACACAQ13085 2346 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 HELZ2Q9BYK8 2649 aaKnown RBP17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 SGK1O00141 431 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 NOL4O94818 638 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 CKMP06732 381 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 CYP2F1P24903 491 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 SLC6A11P48066 632 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 LIG4P49917 911 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 SMARCB1Q12824 385 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 TMEM132DQ14C87 1099 aa17.64■□□□□ 0.41
NECTIN1-202ENST00000340882 KRT79Q5XKE5 535 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms