RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CCDC130P13994 396 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 MAGEA11P43364 429 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 DUSP4Q13115 394 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 DRAP1Q14919 205 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 UVSSAQ2YD98 709 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 LIN9Q5TKA1 542 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 ANKRD54Q6NXT1 300 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 CCDC149Q6ZUS6 474 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 FAM35AQ86V20 835 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 MSLNLQ96KJ4 702 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 STK33Q9BYT3 514 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 RHOBTB2Q9BYZ6 727 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 SFXN1Q9H9B4 322 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 CYP4F11Q9HBI6 524 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 ZDHHC7Q9NXF8 308 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 CEP72Q9P209 647 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 YIPF1Q9Y548 306 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 NOTCH4Q99466 2003 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 ITIH6Q6UXX5 1313 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 FOXN3O00409 490 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 PRRG1O14668 218 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 TPM3P06753 285 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 PNMA6AP0CW24 399 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 TRIM21P19474 475 aaKnown RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 CDR1P51861 262 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 RAPGEF1Q13905 1077 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 FIGNQ5HY92 759 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 ARHGAP17Q68EM7 881 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 ELMSAN1Q6PJG2 1045 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 HNRNPABQ99729 332 aaKnown RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 ZSWIM1Q9BR11 485 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 ZNF518BQ9C0D4 1074 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 DNAI2Q9GZS0 605 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-202ENST00000331450 NLRC4Q9NPP4 1024 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 TMEM30AQ9NV96 361 aa17.05■□□□□ 0.32
LRRC28-202ENST00000331450 CLDN5O00501 218 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 RFPL2O75678 378 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 POU2F2P09086 479 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 HNRNPA1P09651 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
LRRC28-202ENST00000331450 VDRP11473 427 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 KRT5P13647 590 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
LRRC28-202ENST00000331450 ATF6P18850 670 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 BDNFP23560 247 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 CYP2F1P24903 491 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 ELF1P32519 619 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 CACNA2D1P54289 1103 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 PPP1R26Q5T8A7 1209 aaPredicted RBP17.04■□□□□ 0.32
LRRC28-202ENST00000331450 VSTM1Q6UX27 236 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 FEZF2Q8TBJ5 459 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 SLC2A14Q8TDB8 520 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 BAP1Q92560 729 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 ZNF707Q96C28 371 aaPredicted RBP17.04■□□□□ 0.32
LRRC28-202ENST00000331450 CYFIP2Q96F07 1278 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
LRRC28-202ENST00000331450 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 SLC27A5Q9Y2P5 690 aa17.04■□□□□ 0.32
LRRC28-202ENST00000331450 ATP8B3O60423 1300 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 O00370 1275 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 SOAT2O75908 522 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 CLCN1P35523 988 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 TUFMP49411 452 aaKnown RBP17.03■□□□□ 0.32
LRRC28-202ENST00000331450 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 PPM1LQ5SGD2 360 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 C12orf76Q8N812 135 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-202ENST00000331450 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 EDEM3Q9BZQ6 932 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 S1PR5Q9H228 398 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 CSNK1G1Q9HCP0 422 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 DOCK6Q96HP0 2047 aa17.03■□□□□ 0.32
LRRC28-202ENST00000331450 BRWD1Q9NSI6 2320 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 CYP26A1O43174 497 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 CALCAP01258 141 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 CD19P15391 556 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
LRRC28-202ENST00000331450 ADORA2BP29275 332 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 SOX5P35711 763 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 TWF1Q12792 350 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 SKIV2LQ15477 1246 aaKnown RBP17.02■□□□□ 0.32
LRRC28-202ENST00000331450 VSTM4Q8IW00 320 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 SMRP1Q8NCR6 262 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 HLA-CQ95604 372 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 SEPT5Q99719 369 aaPredicted RBP17.02■□□□□ 0.32
LRRC28-202ENST00000331450 NUP58Q9BVL2 599 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 PRKD2Q9BZL6 878 aa17.02■□□□□ 0.32
LRRC28-202ENST00000331450 TRIM5Q9C035 493 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms