RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ACTN3Q08043 901 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-201ENST00000331163 BFSP2Q13515 415 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 TUBB2AQ13885 445 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 HP1BP3Q5SSJ5 553 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-201ENST00000331163 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 LRRC8DQ7L1W4 858 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 USP6NLQ92738 828 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 FBXL18Q96ME1 805 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 TUBB2BQ9BVA1 445 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 CITO14578 2027 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 CD4P01730 458 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 SPATA31D3P0C874 917 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 KRT10P13645 584 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 PDGFRAP16234 1089 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 GRM5P41594 1212 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 TAF5Q15542 800 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 SPATA31D4Q6ZUB0 917 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-201ENST00000331163 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 ASIC3Q9UHC3 531 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 HEY1Q9Y5J3 304 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 MGEA5O60502 916 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 HSF2BPO75031 334 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 NEBLO76041 1014 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
PDGFB-201ENST00000331163 GCNT1Q02742 428 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 LPIN1Q14693 890 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 PPP1R26Q5T8A7 1209 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-201ENST00000331163 TPCN2Q8NHX9 752 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 EMID1Q96A84 441 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-201ENST00000331163 DNAI2Q9GZS0 605 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 CERS4Q9HA82 394 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 HSPA6P17066 643 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 BDNFP23560 247 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 AP3M2P53677 418 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 KRT81Q14533 505 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 MGAT5BQ3V5L5 792 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 ATG4AQ8WYN0 398 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 SDCBP2Q9H190 292 aa16.74■□□□□ 0.27
PDGFB-201ENST00000331163 E5RJQ4 531 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 SOAT2O75908 522 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 TCP1P17987 556 aaKnown RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 GUCY1A3Q02108 690 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 ACAD10Q6JQN1 1059 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 MAATS1Q7Z4T9 603 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 PGBD4Q96DM1 585 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 C10orf88Q9H8K7 445 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 COL1A2P08123 1366 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 ZSCAN5CA6NGD5 496 aaPredicted RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 F8VP50 259 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 CREB3O43889 395 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 TUBBP07437 444 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 CCNI2Q6ZMN8 369 aaPredicted RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 PPANQ9NQ55 473 aaKnown RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 AMACRQ9UHK6 382 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 TTC7AQ9ULT0 858 aaPredicted RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 SLC27A5Q9Y2P5 690 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 AP1G2O75843 785 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 MICAL2O94851 1124 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 ALDH7A1P49419 539 aaKnown RBP16.73■□□□□ 0.27
PDGFB-201ENST00000331163 SEC24CP53992 1094 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 AMPD2Q01433 879 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 WDR93Q6P2C0 686 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 SERINC5Q86VE9 423 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 SEPT8Q92599 483 aa16.73■□□□□ 0.27
PDGFB-201ENST00000331163 TLDC2A0PJX2 215 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 ARVCFO00192 962 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 IFT88Q13099 833 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 C15orf59Q2T9L4 293 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 ZNF280BQ86YH2 543 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 NME8Q8N427 588 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 YME1L1Q96TA2 773 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 EPB41L5Q9HCM4 733 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 KRT82Q9NSB4 513 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SEPT10Q9P0V9 454 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SNX12Q9UMY4 172 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 ZNF148Q9UQR1 794 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 AGPSO00116 658 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 CAPN15O75808 1086 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 KIF4AO95239 1232 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 TUBB4BP68371 445 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SV2CQ496J9 727 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 KCTD6Q8NC69 237 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 ST13P5Q8NFI4 369 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 MRPL47Q9HD33 250 aaKnown RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 RBM12Q9NTZ6 932 aaKnown RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SPTLC1O15269 473 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 CHRNB2P17787 502 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 LILRA4P59901 499 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms