RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PID1Q7Z2X4 250 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C10orf67Q8IYJ2 551 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 SLC2A14Q8TDB8 520 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ACTRT1Q8TDG2 376 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 FAM172AQ8WUF8 416 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 GOLGA2P5Q9HBQ8 144 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 M0QYT0 321 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 APRTP07741 180 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ALDH3A1P30838 453 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ACADSBP45954 432 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 TPI1P60174 286 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C11orf63Q6NUN7 778 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP2A3Q93084 1043 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C18orf25Q96B23 403 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 AGAP3Q96P47 875 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 RAB6BQ9NRW1 208 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 PCDHB7Q9Y5E2 793 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C22orf31O95567 290 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ODC1P11926 461 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 CCDC130P13994 396 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 CA4P22748 312 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 CD52P31358 61 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 NUMBP49757 651 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 BCAT1P54687 386 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ADCY2Q08462 1091 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 EFHC1Q5JVL4 640 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 VPS52Q8N1B4 723 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 C12orf29Q8N999 325 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 CAPNS2Q96L46 248 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 RBM15Q96T37 977 aaKnown RBP eCLIP9.75□□□□□ -0.852e-7■■■■□ 21.6
TMEM39A-201ENST00000319172 ISCUQ9H1K1 167 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 PLEKHA5Q9HAU0 1116 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 SIX2Q9NPC8 291 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
TMEM39A-201ENST00000319172 ZMYM2Q9UBW7 1377 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 RASSF10A6NK89 507 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 E5RJQ4 531 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 STAMBPO95630 424 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 MT-ND3P03897 115 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 C4BPAP04003 597 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 KYNUQ16719 465 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 GEN1Q17RS7 908 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FYB2Q5VWT5 728 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 IFNL1Q8IU54 200 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FAM71DQ8N9W8 422 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FUT8Q9BYC5 575 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 MINDY3Q9H8M7 445 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 HPCAL4Q9UM19 191 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 DARSP14868 501 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP4AP20648 1035 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 ITGA8P53708 1063 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 IRX4P78413 519 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 MRPS6P82932 125 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 MCL1Q07820 350 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 SNX17Q15036 470 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 LDLRAD1Q5T700 205 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FAXCQ5TGI0 409 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 LRRC31Q6UY01 552 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 TMEM192Q8IY95 271 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FBXO25Q8TCJ0 367 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 SYT15Q9BQS2 421 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 SPON2Q9BUD6 331 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 RSAD1Q9HA92 442 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 PSTPIP1O43586 416 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 AXLP30530 894 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 RPL7AP62424 266 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 CAV1Q03135 178 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 PRKCZQ05513 592 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 MBTD1Q05BQ5 628 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP13A4Q4VNC1 1196 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 TSHZ1Q6ZSZ6 1077 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 KDELC2Q7Z4H8 507 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 EXOC4Q96A65 974 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 ZIM3Q96PE6 472 aa9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-201ENST00000319172 DFFAO00273 331 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 BOLA3Q53S33 107 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 WSCD1Q658N2 575 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 WDR93Q6P2C0 686 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 SLC39A4Q6P5W5 647 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 CDKL3Q8IVW4 592 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 CACNA2D3Q8IZS8 1091 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PPM1NQ8N819 430 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 GABPB2Q8TAK5 448 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 CD99L2Q8TCZ2 262 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PLEKHO2Q8TD55 490 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 USP33Q8TEY7 942 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TBC1D31Q96DN5 1066 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PCYT2Q99447 389 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 CNPY3Q9BT09 278 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms