RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PSMC3P17980 439 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ST3GAL1Q11201 340 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 SLC15A2Q16348 729 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TMEM237Q96Q45 408 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 RGL1Q9NZL6 768 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TNRC6CQ9HCJ0 1690 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 KCNQ3O43525 872 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 E2F6O75461 281 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 RPSAP08865 295 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 OGNP20774 298 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 COPZ1P61923 177 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ZPBP2Q6X784 338 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CHCHD4Q8N4Q1 142 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PDPRQ8NCN5 879 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CFAP36Q96G28 342 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 HEXIM2Q96MH2 286 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 C10orf71Q711Q0 1435 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CYP27B1O15528 508 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 VPS41P49754 854 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TP53BP2Q13625 1128 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 STYK1Q6J9G0 422 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 C9orf16Q9BUW7 83 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 HMG20AQ9NP66 347 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PRPF19Q9UMS4 504 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TMEM114B3SHH9 223 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CHADO15335 359 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 RAD51CO43502 376 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PTK7Q13308 1070 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ITGAVP06756 1048 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CYP3A4P08684 503 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 C12orf56Q8IXR9 622 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 MINDY2Q8NBR6 621 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CCNYQ8ND76 341 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 DCPSQ96C86 337 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CES1P23141 567 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 RPL3P39023 403 aaKnown RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 FLOT2Q14254 428 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 SV2CQ496J9 727 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 MFSD4BQ5TF39 518 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 GDAP1Q8TB36 358 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ZBTB1Q9Y2K1 713 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 ASTN2O75129 1339 aaPredicted RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 FAM25AB3EWG3 89 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 FAM25CB3EWG5 89 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 FAM25GB3EWG6 89 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 IFRD1O00458 451 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 KPNA6O60684 536 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 GSNP06396 782 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 HNRNPCP07910 306 aaKnown RBP eCLIP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NCKAP1LP55160 1127 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PPIL2Q13356 520 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 GPR141Q7Z602 305 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CCDC33Q8N5R6 958 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ANKRD13CQ8N6S4 541 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RNPEPL1Q9HAU8 725 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CYLDQ9NQC7 956 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 STMN3Q9NZ72 180 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 SF3B1O75533 1304 aaKnown RBP eCLIP9.16□□□□□ -0.944e-7■■■■■ 133.7
COL6A5-202ENST00000312481 SPATA31A6Q5VVP1 1343 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CYP3A7-CYP3A51PA0A087WV96 503 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CYP3A7P24462 503 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NFX1Q12986 1120 aaKnown RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF568Q3ZCX4 644 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 XPO7Q9UIA9 1087 aaKnown RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 TMED10P49755 219 aaKnown RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 HYIQ5T013 277 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 MYO1HQ8N1T3 1032 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NWD2Q9ULI1 1742 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NTRK3Q16288 839 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RCOR3Q9P2K3 495 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CDH6P55285 790 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 DLG4P78352 724 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 BFSP2Q13515 415 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NCOA4Q13772 614 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 MTX3Q5HYI7 312 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CDR2LQ86X02 465 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ABI1Q8IZP0 508 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 NRXN3Q9Y4C0 1643 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms