RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF3-201ENST00000296315 BCL9O00512 1426 aa10.84□□□□□ -0.67
ARHGEF3-201ENST00000296315 SETSIPP0DME0 302 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 RARBP10826 455 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 RAG1P15918 1043 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 GRIA2P42262 883 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 GPX6P59796 221 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 IGBP1P78318 339 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PDK3Q15120 406 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 TMCO4Q5TGY1 634 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 DOLKQ9UPQ8 538 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ACTL7BQ9Y614 415 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 BCORQ6W2J9 1755 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PRPF4O43172 522 aaKnown RBP eCLIP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 TYROBPO43914 113 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ECE2O60344 883 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 HOXA7P31268 230 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 GDF10P55107 478 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PDE1BQ01064 536 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 BMT2Q1RMZ1 405 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 BRDTQ58F21 947 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 CRLF3Q8IUI8 442 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ICA1LQ8NDH6 482 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 LENG9Q96B70 501 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 HSPBAP1Q96EW2 488 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 TUBB6Q9BUF5 446 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PIH1D1Q9NWS0 290 aaKnown RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 FOXD2O60548 495 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ZNF189O75820 626 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 CLPTM1O96005 669 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 MUTP22033 750 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PMLP29590 882 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ELK3P41970 407 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 PRELPP51888 382 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 ADARP55265 1226 aaKnown RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 CLEC16AQ2KHT3 1053 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 SCARA5Q6ZMJ2 495 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 SYDE1Q6ZW31 735 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 HPS6Q86YV9 775 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 C12orf50Q8NA57 414 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 HSPH1Q92598 858 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 LENG1Q96BZ8 264 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 VAV3Q9UKW4 847 aa10.83□□□□□ -0.68
ARHGEF3-201ENST00000296315 NOP56O00567 594 aaKnown RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 MYCLP12524 364 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 VCLP18206 1134 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 ACOT2P49753 483 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CCR3P51677 355 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CASC4Q6P4E1 433 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SV2AQ7L0J3 742 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 PTAR1Q7Z6K3 402 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 RFX6Q8HWS3 928 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 E2F7Q96AV8 911 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 IFT43Q96FT9 208 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 ATXN7L3BQ96GX2 97 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CST8O60676 142 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 RAD17O75943 681 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 PROSCO94903 275 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 WEE2P0C1S8 567 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SLC1A1P43005 524 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 PSMC5P62195 406 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CENPCQ03188 943 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 AP3B2Q13367 1082 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 VWA5B1Q5TIE3 1220 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CDHR3Q6ZTQ4 885 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 OTOP1Q7RTM1 612 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 AMIGO3Q86WK7 504 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 APLFQ8IW19 511 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 DEFB107AQ8IZN7 70 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 ACTL9Q8TC94 416 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SRPK1Q96SB4 655 aaKnown RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SIKE1Q9BRV8 207 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 MAN1C1Q9NR34 630 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 IQANK1A0A1B0GTG1 560 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 DENND3A2RUS2 1198 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 KBTBD13C9JR72 458 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 BOLA2-SMG1P6H3BVE0 249 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 IPO5O00410 1097 aaKnown RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 LIASO43766 372 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 UGT1A9O60656 530 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CD19P15391 556 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 DSG3P32926 999 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 SHMT1P34896 483 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 GMPRP36959 345 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 OTUD4Q01804 1114 aaKnown RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 GK3PQ14409 553 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 CNGA3Q16281 694 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 EFHC1Q5JVL4 640 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 RNF168Q8IYW5 571 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-201ENST00000296315 MRPL1Q9BYD6 325 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms