RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 C1orf54Q8WWF1 131 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 SNF8Q96H20 258 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 PTPN18Q99952 460 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 DNAI2Q9GZS0 605 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 PRDM4Q9UKN5 801 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 AGAP1Q9UPQ3 857 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 EFR3BQ9Y2G0 817 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 ATP8A1Q9Y2Q0 1164 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 SCN1AP35498 2009 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 MANSC4A6NHS7 340 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SRRM3A6NNA2 597 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 DYNC1LI2O43237 492 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 TLL1O43897 1013 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 CSDE1O75534 798 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 F2P00734 622 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 KRT7P08729 469 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 KRT3P12035 628 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 RARGP13631 454 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 NR1D1P20393 614 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 KCNJ1P48048 391 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 CPT1AP50416 773 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 IRAK1P51617 712 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 YARSP54577 528 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SNX16P57768 344 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 RPL7AP62424 266 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 INCA1Q0VD86 236 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 NFX1Q12986 1120 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SNX1Q13596 522 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 HADHQ16836 314 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 ZFYVE27Q5T4F4 411 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 LLGL2Q6P1M3 1020 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 DENND1BQ6P3S1 775 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 NOTUMQ6P988 496 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 DRICH1Q6PGQ1 229 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 ZNF365Q70YC5 407 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 TRMT10CQ7L0Y3 403 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 CCDC89Q8N998 374 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SLC4A11Q8NBS3 891 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 MCEEQ96PE7 176 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 TMEM109Q9BVC6 243 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 FRMD8P1Q9BZ68 369 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 ADAMTS10Q9H324 1103 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SYNCQ9H7C4 482 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 SETD4Q9NVD3 440 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 ASIC3Q9UHC3 531 aa9.76□□□□□ -0.85
CLRN1-201ENST00000295911 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 GNEQ9Y223 722 aaKnown RBP9.76□□□□□ -0.85
CLRN1-201ENST00000295911 MBLAC1A4D2B0 266 aaPredicted RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 MEFVO15553 781 aaPredicted RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 KRT1P04264 644 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 SMIM10L2AP0DMW4 78 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 SMIM10L2BP0DMW5 78 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 ATF2P15336 505 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 RAP1GAPP47736 663 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 GABRB2P47870 512 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 CDH8P55286 799 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 INHBEP58166 350 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 PSMC1P62191 440 aaKnown RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 GNGT1P63211 74 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 TFDP3Q5H9I0 405 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 OLFML2BQ68BL8 750 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 KCTD16Q68DU8 428 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 LRRC31Q6UY01 552 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 CATSPER4Q7RTX7 472 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 NME8Q8N427 588 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 BEST2Q8NFU1 509 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 CCDC114Q96M63 670 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 HEXIM2Q96MH2 286 aaKnown RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 SLITRK1Q96PX8 696 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 PPP1R16BQ96T49 567 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 KATNAL1Q9BW62 490 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 NT5C1AQ9BXI3 368 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 ELOVL4Q9GZR5 314 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 AP5M1Q9H0R1 490 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 STMN4Q9H169 189 aaPredicted RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 SDCBP2Q9H190 292 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 CENPHQ9H3R5 247 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 SMYD3Q9H7B4 428 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 RRAGCQ9HB90 399 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 CHST7Q9NS84 486 aa9.75□□□□□ -0.85
CLRN1-201ENST00000295911 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 DRG1Q9Y295 367 aaKnown RBP9.75□□□□□ -0.85
CLRN1-201ENST00000295911 F8VP50 259 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 EIF3HO15372 352 aaKnown RBP eCLIP9.74□□□□□ -0.85
CLRN1-201ENST00000295911 XPOTO43592 962 aaKnown RBP9.74□□□□□ -0.85
CLRN1-201ENST00000295911 KPNA6O60684 536 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 GPR32O75388 356 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 RNF8O76064 485 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 MICAL2O94851 1124 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 NPTXRO95502 500 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 GNAT1P11488 350 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 CYP2C9P11712 490 aa9.74□□□□□ -0.85
CLRN1-201ENST00000295911 DARSP14868 501 aaKnown RBP9.74□□□□□ -0.85
CLRN1-201ENST00000295911 ATF7P17544 494 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms