RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 VAV2P52735 878 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 DYNLL1P63167 89 aaKnown RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 TUBB4BP68371 445 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 KIF23Q02241 960 aaPredicted RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 NRG1Q02297 640 aaPredicted RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 SP4Q02446 784 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 RESTQ13127 1097 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 HLFQ16534 295 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 CCDC38Q502W7 563 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 E4F1Q66K89 784 aaPredicted RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 CABP7Q86V35 215 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 CCDC65Q8IXS2 484 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 FNIP1Q8TF40 1166 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 PIGBQ92521 554 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 TNFRSF25Q93038 417 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 WNT8BQ93098 351 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 JAKMIP2Q96AA8 810 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 RBM17Q96I25 401 aaKnown RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 CGRRF1Q99675 332 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 C5AR2Q9P296 337 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 IFT80Q9P2H3 777 aaPredicted RBP3.11□□□□□ -1.91
HERC4-201ENST00000277817 IGSF9Q9P2J2 1179 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 CAPN11Q9UMQ6 739 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 PPP2R2CQ9Y2T4 447 aa3.11□□□□□ -1.91
HERC4-201ENST00000277817 CYP2D7A0A087X1C5 515 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CAPN8A6NHC0 703 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SMIM23A6NLE4 172 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 KCNJ18B7U540 433 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 KLRF2D3W0D1 207 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 GCOM1H8Y6P7 765 aaPredicted RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 MYZAPP0CAP1 466 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ACSL1P33121 698 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SLC1A4P43007 532 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 OCRLQ01968 901 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 KCNJ12Q14500 433 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SEC23AQ15436 765 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CALCRLQ16602 461 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 USH1GQ495M9 461 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 C4orf50Q6ZRC1 276 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 MICALCLQ6ZW33 695 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 RRAGAQ7L523 313 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 VSIG10LQ86VR7 867 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 NLRP10Q86W26 655 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 BLIDQ8IZY5 108 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TTC16Q8NEE8 873 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PGBD1Q96JS3 809 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 EYA3Q99504 573 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TCHPQ9BT92 498 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SEMA4AQ9H3S1 761 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 DNAJC18Q9H819 358 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ZFAND3Q9H8U3 227 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ZMAT3Q9HA38 289 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 PIH1D3Q9NQM4 214 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 COL20A1Q9P218 1284 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 DYRK1BQ9Y463 629 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 A0A1W2PPH5 198 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 RNF225M0QZC1 329 aaPredicted RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 ACKR2O00590 384 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SCG2P13521 617 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TYRP14679 529 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 RPL13P26373 211 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 SMARCA1P28370 1054 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 GRK4P32298 578 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 GJC1P36383 396 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 STAT5AP42229 794 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CRKLP46109 303 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 ADCY7P51828 1080 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 MNAT1P51948 309 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 DRG2P55039 364 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 MFSD14BQ5SR56 506 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ARMC4Q5T2S8 1044 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CFAP58Q5T655 872 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 UTP14CQ5TAP6 766 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 NCAPH2Q6IBW4 605 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CATSPERGQ6ZRH7 1159 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CEP68Q76N32 757 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 UBE3DQ7Z6J8 389 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 DDX53Q86TM3 631 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 HOOK3Q86VS8 718 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 C2CD5Q86YS7 1000 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 C10orf67Q8IYJ2 551 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 LCORLQ8N3X6 602 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 OR8K1Q8NGG5 319 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CENPTQ96BT3 561 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PAIP2Q9BPZ3 127 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 DHX36Q9H2U1 1008 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 SMURF2Q9HAU4 748 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PREBQ9HCU5 417 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 NECTIN3Q9NQS3 549 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 THG1LQ9NWX6 298 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 FRRS1LQ9P0K9 344 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.1□□□□□ -1.91
HERC4-201ENST00000277817 MED23Q9ULK4 1368 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 EBAG9O00559 213 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CETN3O15182 167 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TUBBP07437 444 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 IVLP07476 585 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ALAS2P22557 587 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 EEF1GP26641 437 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 CASP14P31944 242 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms