RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ART3Q13508 389 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 KYAT1Q16773 422 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF354CQ86Y25 554 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 CPA5Q8WXQ8 436 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 MARCOQ9UEW3 520 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 LRCH1Q9Y2L9 728 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 HOXC6P09630 235 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 ICAM3P32942 547 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 AUHQ13825 339 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 WASHC2DQ5SRD0 308 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 TREML2Q5T2D2 321 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 SNX30Q5VWJ9 437 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 MTDHQ86UE4 582 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 RBBP8NLQ8NC74 664 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 CLMNQ96JQ2 1002 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 ANLNQ9NQW6 1124 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 MYH4Q9Y623 1939 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 GPC4O75487 556 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 CALB1P05937 261 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 EPHB2P29323 1055 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 GNA15P30679 374 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 C3orf62Q6ZUJ4 267 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 ANKRD23Q86SG2 305 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 EFHD1Q9BUP0 239 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 FAM96AQ9H5X1 160 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 HSPBP1Q9NZL4 362 aa12.08□□□□□ -0.48
CLSTN3-201ENST00000266546 E7ENQ6 273 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 LCA5LO95447 670 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 ZBTB48P10074 688 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 SERPINB3P29508 390 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 MMP13P45452 471 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 GHRHRQ02643 423 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 RIPK1Q13546 671 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 DGKZQ13574 1117 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 FSCBQ5H9T9 825 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 C11orf63Q6NUN7 778 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TRIM72Q6ZMU5 477 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC35C1Q96A29 364 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC45A1Q9Y2W3 748 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 ATP9AO75110 1047 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 PRKCIP41743 596 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 NAMPTP43490 491 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 CACNA2D1P54289 1103 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 CNTN2Q02246 1040 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 MTM1Q13496 603 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TRIP10Q15642 601 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 HSPH1Q92598 858 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 CORO1CQ9ULV4 474 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 UNC5CO95185 931 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 KRT16P08779 473 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 HGSNATQ68CP4 663 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TRIM50Q86XT4 487 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC20A1Q8WUM9 679 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 CKAP2Q8WWK9 683 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 ANKRD36BP1Q96IX9 119 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF668Q96K58 619 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 NLRP4Q96MN2 994 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 METTL5Q9NRN9 209 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 COL20A1Q9P218 1284 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
CLSTN3-201ENST00000266546 XPOTO43592 962 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 AP1G2O75843 785 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 ATP4AP20648 1035 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 GARTP22102 1010 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 NCALDP61601 193 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 ECM1Q16610 540 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 ZCWPW2Q504Y3 356 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 DUPD1Q68J44 220 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PPP1R16BQ96T49 567 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PARVAQ9NVD7 372 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 CBX6O95503 412 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 HSPA4LO95757 839 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PYGMP11217 842 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 MX2P20592 715 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms