RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TPX2Q9ULW0 747 aaKnown RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 PRPF4O43172 522 aaKnown RBP eCLIP11.75□□□□□ -0.53
MSH3-201ENST00000265081 STRNO43815 780 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 CDR1P51861 262 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 ZNF667Q5HYK9 610 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 ANKRD23Q86SG2 305 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 KAT2BQ92831 832 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 TJP2Q9UDY2 1190 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
MSH3-201ENST00000265081 NF2P35240 595 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 ADCY8P40145 1251 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 LONRF1Q17RB8 773 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 P3H1Q32P28 736 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 TRNP1Q6NT89 227 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 DENND1AQ8TEH3 1009 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 TSPAN18Q96SJ8 248 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 ACTR5Q9H9F9 607 aaPredicted RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 BCCIPQ9P287 314 aaKnown RBP eCLIP11.75□□□□□ -0.53
MSH3-201ENST00000265081 PRKAG3Q9UGI9 489 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 BARX2Q9UMQ3 279 aaPredicted RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 TRUB2O95900 331 aaKnown RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 KRT10P13645 584 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 ZNF143P52747 638 aaPredicted RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 MAP1SQ66K74 1059 aaPredicted RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 CCDC50Q8IVM0 306 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CKAP2Q8WWK9 683 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 FAF2Q96CS3 445 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 WDR83Q9BRX9 315 aaKnown RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 SLC12A4Q9UP95 1085 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CDH16O75309 829 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CETN2P41208 172 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 MAGEA4P43358 317 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CYP4A22Q5TCH4 519 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 PCGF5Q86SE9 256 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CYP4X1Q8N118 509 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 GPR32O75388 356 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 KRT3P12035 628 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
MSH3-201ENST00000265081 SCNN1AP37088 669 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 MAGEA6P43360 314 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 ADAM17P78536 824 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 NR1H3Q13133 447 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 MPP2Q14168 576 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 KYNUQ16719 465 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 ODF2Q5BJF6 829 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 MZB1Q8WU39 189 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 NME7Q9Y5B8 376 aa11.74□□□□□ -0.53
MSH3-201ENST00000265081 SCN1AP35498 2009 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 A0A087WZ62 844 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 MBLAC1A4D2B0 266 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 ITGB3P05106 788 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 MMP3P08254 477 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 EPHX2P34913 555 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 STILQ15468 1287 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 APOC4-APOC2K7ER74 178 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 RASSF9O75901 435 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 APOC2P02655 101 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 ADORA2AP29274 412 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 DUSP28Q4G0W2 176 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 ANKS4BQ8N8V4 417 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 STK32AQ8WU08 396 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.538e-7■■■■□ 23
MSH3-201ENST00000265081 SNX27Q96L92 541 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 FNDC1Q4ZHG4 1894 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 DNAJC8O75937 253 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 GSTA1P08263 222 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 HOXC8P31273 242 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 LACTBP83111 547 aaPredicted RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 SPRED3Q2MJR0 410 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 EFHC2Q5JST6 749 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 GKAP1Q5VSY0 366 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms