RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 INSL6Q9Y581 213 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 DLEC1Q9Y238 1755 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 POLR2AP24928 1970 aaKnown RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 LTBP1Q14766 1721 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 WDR90Q96KV7 1748 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 RTN3O95197 1032 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 F9P00740 461 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 PLEKP08567 350 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 SLC2A3P11169 496 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 IGFBP4P22692 258 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CXCR5P32302 372 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CDH6P55285 790 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CCZ1BP86790 482 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CCZ1P86791 482 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 KCNMA1Q12791 1236 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CLEC16AQ2KHT3 1053 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 RNF219Q5W0B1 726 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 PDCL2Q8N4E4 241 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 FAM84AQ96KN4 292 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 TSNARE1Q96NA8 513 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 ERVK-5Q9HDB9 667 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 ARFGAP3Q9NP61 516 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 PDLIM7Q9NR12 457 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 ECM29Q5VYK3 1845 aa8.71□□□□□ -1.02
GTF3C3-201ENST00000263956 PABPN1LA6NDY0 278 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 SGK1O00141 431 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 HSF2BPO75031 334 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 GPR32O75388 356 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 MICAL2O94851 1124 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 BDNFP23560 247 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 GJA8P48165 433 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 VPS41P49754 854 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 MTERF4Q7Z6M4 381 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 PALB2Q86YC2 1186 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 RYBPQ8N488 228 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 B3GALNT2Q8NCR0 500 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 TOX2Q96NM4 488 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 HPCAL4Q9UM19 191 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 COMMD10Q9Y6G5 202 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 TRIM66O15016 1216 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 CSF2RAP15509 400 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 YWHAQP27348 245 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 HARS2P49590 506 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 CLCNKBP51801 687 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 C1QBPQ07021 282 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 BBOF1Q8ND07 529 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 RNF39Q9H2S5 420 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 UXTQ9UBK9 157 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 ENPP3O14638 875 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 CST3P01034 146 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 CKMP06732 381 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 ZFXP17010 805 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 XPAP23025 273 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 BSPRYQ5W0U4 402 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 NUDT18Q6ZVK8 323 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 FAM71AQ8IYT1 594 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 SEMA4DQ92854 862 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 OXCT2Q9BYC2 517 aaPredicted RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 GANQ9H2C0 597 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 AGO3Q9H9G7 860 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 TLR8Q9NR97 1041 aaKnown RBP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 DDIT4Q9NX09 232 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 BCCIPQ9P287 314 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 ARHGAP20Q9P2F6 1191 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 STYXL1Q9Y6J8 313 aa8.7□□□□□ -1.02
GTF3C3-201ENST00000263956 ZBED1O96006 694 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 CHRNA1P02708 482 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 MYL4P12829 197 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 CCDC130P13994 396 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 ZNF268Q14587 947 aaPredicted RBP8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 ZDHHC17Q8IUH5 632 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 TSC1Q92574 1164 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 VCPIP1Q96JH7 1222 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 THAP2Q9H0W7 228 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 IL23AQ9NPF7 189 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 SYN3O14994 580 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 AP5Z1O43299 807 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 ATMINO43313 823 aaPredicted RBP8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 ATF2P15336 505 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 NNMTP40261 264 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 PPM1FP49593 454 aaPredicted RBP8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 LILRA4P59901 499 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 TPI1P60174 286 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 SNX1Q13596 522 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 CASC4Q6P4E1 433 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 EFCAB13Q8IY85 973 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 EXOC4Q96A65 974 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 CDK5RAP1Q96SZ6 601 aaKnown RBP8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 SPON2Q9BUD6 331 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 HEMGNQ9BXL5 484 aa8.69□□□□□ -1.02
GTF3C3-201ENST00000263956 FAM124BQ9H5Z6 455 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms