RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HAUS8Q9BT25 410 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ABI2Q9NYB9 513 aaPredicted RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 CAPN6Q9Y6Q1 641 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 LRP6O75581 1613 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 E5RI56 91 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 HMGCRP04035 888 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TERF2Q15554 542 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ANKRD7Q92527 254 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 SDCCAG3Q96C92 435 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 LACRTQ9GZZ8 138 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ZNF541Q9H0D2 1346 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 LIG3P49916 1009 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 EVX2Q03828 476 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 SH3BP5LQ7L8J4 393 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TBC1D1Q86TI0 1168 aaPredicted RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 MAML1Q92585 1016 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ELAC2Q9BQ52 826 aaKnown RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 NAT9Q9BTE0 207 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 AP5Z1O43299 807 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ICAM3P32942 547 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 MAGEA4P43358 317 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 MARSP56192 900 aaKnown RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 C10orf120Q5SQS8 335 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TTC23LQ6PF05 361 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 NUDCD3Q8IVD9 361 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TATDN2Q93075 761 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 CHMP6Q96FZ7 201 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 ZBTB18Q99592 522 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 SYT15Q9BQS2 421 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 DYRK4Q9NR20 520 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 DPP7Q9UHL4 492 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 BAZ2BQ9UIF8 2168 aaKnown RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 NEMP1O14524 444 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 FGFR4P22455 802 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 CACNB2Q08289 660 aaPredicted RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 CCNG2Q16589 344 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 IL31RAQ8NI17 732 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TRABDQ9H4I3 376 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 TRPC7Q9HCX4 862 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 MRPL40Q9NQ50 206 aaKnown RBP15.66■□□□□ 0.1
UBE4B-201ENST00000253251 WHRNQ9P202 907 aa15.66■□□□□ 0.1
UBE4B-201ENST00000253251 NCAM2O15394 837 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ALDH2P05091 517 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 POLBP06746 335 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ETFBP38117 255 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ZNF200P98182 395 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-201ENST00000253251 MUM1Q2TAK8 710 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 CTXN3Q4LDR2 81 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 TIGD7Q6NT04 549 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-201ENST00000253251 GOLPH3Q9H4A6 298 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ASTN1O14525 1302 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 LACTBL1A8MY62 500 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ANKRD63C9JTQ0 380 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 PPP1R11O60927 126 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-201ENST00000253251 USP2O75604 605 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-201ENST00000253251 SLFN11Q7Z7L1 901 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 SLC20A1Q8WUM9 679 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 EPC1Q9H2F5 836 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 VCX3AQ9NNX9 186 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 MRGBPQ9NV56 204 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 SUN2Q9UH99 717 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ATP9BO43861 1147 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 LRG1P02750 347 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 EPHB2P29323 1055 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ITGA8P53708 1063 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 NAA30Q147X3 362 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-201ENST00000253251 SNCBQ16143 134 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 ACCSLQ4AC99 568 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 MTMR8Q96EF0 704 aa15.65■□□□□ 0.1
UBE4B-201ENST00000253251 SMIM24O75264 130 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 URODP06132 367 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 SPRP35270 261 aaPredicted RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ART3Q13508 389 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 TRADDQ15628 312 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 DRC3Q9H069 523 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 RABGAP1LQ5R372 815 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 NOA1Q8NC60 698 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 TRAPPC12Q8WVT3 735 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 UROC1Q96N76 676 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 PACSIN1Q9BY11 444 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 FBXO44Q9H4M3 255 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ZBTB39O15060 712 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 CLK2P49760 499 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ARHGEF19Q8IW93 802 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 PPTC7Q8NI37 304 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 FAM172AQ8WUF8 416 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 TSSK1BQ9BXA7 367 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 RRP15Q9Y3B9 282 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 CASQ2O14958 399 aaPredicted RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ZBTB22O15209 634 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 GEMP55040 296 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 PTENP60484 403 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ILF2Q12905 390 aaKnown RBP15.64■□□□□ 0.09
UBE4B-201ENST00000253251 IL31Q6EBC2 164 aa15.64■□□□□ 0.09
UBE4B-201ENST00000253251 ABHD15Q6UXT9 468 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms