RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 RILPQ96NA2 401 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 FZD1Q9UP38 647 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 PGM1P36871 562 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 MMP13P45452 471 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CAV1Q03135 178 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 MCL1Q07820 350 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 RPS6KA2Q15349 733 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 STILQ15468 1287 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 FAM102AQ5T9C2 384 aaPredicted RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 ANO7Q6IWH7 933 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 METTL7BQ6UX53 244 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SLC30A5Q8TAD4 765 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 C18orf8Q96DM3 657 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 PCSK1NQ9UHG2 260 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 EXOC1LA0A1B0GW35 172 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CD4P01730 458 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 PTPN4P29074 926 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 VGLL4Q14135 290 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 BBS9Q3SYG4 887 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 C1orf146Q5VVC0 180 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CBWD2Q8IUF1 395 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 WDR60Q8WVS4 1066 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 HAS1Q92839 578 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SERPINB12Q96P63 405 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SIK2Q9H0K1 926 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 EML1O00423 815 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 SHBGP04278 402 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 SNHG28P0DPA3 235 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GARSP41250 739 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 CACNB2Q08289 660 aaPredicted RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 ZNF484Q5JVG2 852 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 CCDC80Q76M96 950 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 NOP9Q86U38 636 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 ZNF677Q86XU0 584 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 DUSP9Q99956 384 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 A6NHS1 94 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 PRPF31Q8WWY3 499 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 TRIM62Q9BVG3 475 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 CACYBPQ9HB71 228 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 OGTO15294 1046 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 KRT3P12035 628 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 EPHB2P29323 1055 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 RAD51Q06609 339 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 CNGA2Q16280 664 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GRAMD1BQ3KR37 738 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 CCDC137Q6PK04 289 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 PYROXD1Q8WU10 500 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 CPA5Q8WXQ8 436 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 MPP4Q96JB8 637 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 TMEM237Q96Q45 408 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 TRPC7Q9HCX4 862 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 ARHGEF3Q9NR81 526 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 DNAJC17Q9NVM6 304 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 NAGPAQ9UK23 515 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 SLC4A7Q9Y6M7 1214 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GTPBP10A4D1E9 387 aaKnown RBP11.47□□□□□ -0.57
COPA-201ENST00000241704 F8W8V4 182 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GPR182O15218 404 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 PDE5AO76074 875 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 AKR1A1P14550 325 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GTF2H1P32780 548 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GSTA3Q16772 222 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 WDR18Q9BV38 432 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 GOLPH3Q9H4A6 298 aa11.47□□□□□ -0.57
COPA-201ENST00000241704 A0A087X0T9 212 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 PQBP1O60828 265 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 FAM228BP0C875 321 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 RNF43Q68DV7 783 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 CDR2LQ86X02 465 aaPredicted RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 SEPT8Q92599 483 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 YME1L1Q96TA2 773 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 RPL26L1Q9UNX3 145 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 H3BRB1 525 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 KPNA6O60684 536 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms