RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FGFBP2Q9BYJ0 223 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CAAP1Q9H8G2 361 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 TRIM39Q9HCM9 518 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 KCND2Q9NZV8 630 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 CWC15Q9P013 229 aaKnown RBP8.51□□□□□ -1.05
CXCR4-201ENST00000241393 VPS18Q9P253 973 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 SEL1LQ9UBV2 794 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
CXCR4-201ENST00000241393 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 FAM47E-STBD1D6RA91 191 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 FAM86B1E9PN63 330 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 H0YIN7 160 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 H7BY64 318 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 MSH4O15457 936 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 TBCAO75347 108 aaKnown RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 IVLP07476 585 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 FAM86B2P0C5J1 330 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 EPB41P11171 864 aaKnown RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 ACTN2P35609 894 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 STAT3P40763 770 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 RBM5P52756 815 aaKnown RBP eCLIP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 EPHB4P54760 987 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 C2orf54Q08AI8 447 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 KLHL30Q0D2K2 578 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 TCP10Q12799 353 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 KCNT2Q6UVM3 1135 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 CEP128Q6ZU80 1094 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 LRRTM3Q86VH5 581 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 SFR1Q86XK3 245 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 CPNE8Q86YQ8 564 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 EIF1ADQ8N9N8 165 aaKnown RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 NLGN2Q8NFZ4 835 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.5□□□□□ -1.057e-8■■■■■ 54.2
CXCR4-201ENST00000241393 CAVIN3Q969G5 261 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 GJA10Q969M2 543 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 HHIPL1Q96JK4 782 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 P2RX7Q99572 595 aaKnown RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 REEP2Q9BRK0 252 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 SELENOOQ9BVL4 669 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 ADAMTS10Q9H324 1103 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 NLRC4Q9NPP4 1024 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 TBC1D7Q9P0N9 293 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 INTUQ9ULD6 942 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 COA3Q9Y2R0 106 aaPredicted RBP8.5□□□□□ -1.05
CXCR4-201ENST00000241393 RABGAP1Q9Y3P9 1069 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 TRAF6Q9Y4K3 522 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
CXCR4-201ENST00000241393 IGLV3-22A0A075B6J6 115 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ERICH4A6NGS2 130 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CRTAMO95727 393 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 GH2P01242 217 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CD96P40200 585 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TNNT3P45378 269 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 LMAN1P49257 510 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 IGBP1P78318 339 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 IKQ13123 557 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 PPP2R5CQ13362 524 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 RAPGEF1Q13905 1077 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 LRP8Q14114 963 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 EXOC3L4Q17RC7 722 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ZPBP2Q6X784 338 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 LEKR1Q6ZMV7 388 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 GBP6Q6ZN66 633 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 STXBP4Q6ZWJ1 553 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 RCBTB1Q8NDN9 531 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 EIF2AK1Q9BQI3 630 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 DEFB129Q9H1M3 183 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 PAK6Q9NQU5 681 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TMOD2Q9NZR1 351 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ADGRE2Q9UHX3 823 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ASTN1O14525 1302 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 A0A087X0T9 212 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 A0A0A6YYK5 440 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 C7orf72A4D263 438 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ADAM23O75077 832 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 PSMD10O75832 226 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 FLOT1O75955 427 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SYF2O95926 243 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NR3C1P04150 777 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 FAM228BP0C875 321 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 UCHL3P15374 230 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 PON1P27169 355 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 HOXD13P35453 343 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 GDNFP39905 211 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ARL4AP40617 200 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CASP5P51878 434 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms