RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 ITIH3Q06033 890 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 MAPRE1Q15691 268 aaKnown RBP23.65■■□□□ 1.38
HOXB7-201ENST00000239165 ITIH6Q6UXX5 1313 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 SLC4A11Q8NBS3 891 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 B3GALNT2Q8NCR0 500 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 NEK11Q8NG66 645 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 C2orf15Q8WU43 125 aaKnown RBP23.65■■□□□ 1.38
HOXB7-201ENST00000239165 STK33Q9BYT3 514 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 TTYH3Q9C0H2 523 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 AFF4Q9UHB7 1163 aaKnown RBP23.65■■□□□ 1.38
HOXB7-201ENST00000239165 MUTYHQ9UIF7 546 aa23.65■■□□□ 1.38
HOXB7-201ENST00000239165 TRIOO75962 3097 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 MYBPHLA2RUH7 354 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 VNN2O95498 520 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 CPB1P15086 417 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 ATF2P15336 505 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 EPCAMP16422 314 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 NFE2Q16621 373 aaPredicted RBP23.64■■□□□ 1.37
HOXB7-201ENST00000239165 MYCBPAPQ8TBZ2 947 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 HDAC7Q8WUI4 952 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 TMEM176AQ96HP8 235 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 RPGRIP1Q96KN7 1286 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 TMLHEQ9NVH6 421 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 HSFX1Q9UBD0 423 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 FBXW11Q9UKB1 542 aa23.64■■□□□ 1.37
HOXB7-201ENST00000239165 ATP2C2O75185 946 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 GLUD1P00367 558 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 PAEPP09466 180 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 JAM2P57087 298 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 PSMC1P62191 440 aaKnown RBP23.63■■□□□ 1.37
HOXB7-201ENST00000239165 SLC39A12Q504Y0 691 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 CES5AQ6NT32 575 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 TMEM270Q6UE05 265 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 RNF19BQ6ZMZ0 732 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 RTL10Q7L3V2 364 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 IQCDQ96DY2 449 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 FUBP3Q96I24 572 aaKnown RBP eCLIP23.63■■□□□ 1.37
HOXB7-201ENST00000239165 EDEM3Q9BZQ6 932 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 ABCB6Q9NP58 842 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 DZANK1Q9NVP4 752 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 CEP72Q9P209 647 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 CDH22Q9UJ99 828 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 GTF3C4Q9UKN8 822 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 PCDHB4Q9Y5E5 795 aa23.63■■□□□ 1.37
HOXB7-201ENST00000239165 MTMR11A4FU01 709 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 PAPLNO95428 1278 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 POLR2FP61218 127 aaKnown RBP23.62■■□□□ 1.37
HOXB7-201ENST00000239165 DRAP1Q14919 205 aaPredicted RBP23.62■■□□□ 1.37
HOXB7-201ENST00000239165 PTPN21Q16825 1174 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 CFAP221Q4G0U5 840 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 ACOT1Q86TX2 421 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 GLYCTKQ8IVS8 523 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 TCEAL8Q8IYN2 117 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 FAM71AQ8IYT1 594 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 SPPL2BQ8TCT7 592 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 PCMTD1Q96MG8 357 aaPredicted RBP23.62■■□□□ 1.37
HOXB7-201ENST00000239165 NUP58Q9BVL2 599 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 DNAI2Q9GZS0 605 aa23.62■■□□□ 1.37
HOXB7-201ENST00000239165 F8VZ95 297 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 RNF225M0QZC1 329 aaPredicted RBP23.61■■□□□ 1.37
HOXB7-201ENST00000239165 FOXN3O00409 490 aaPredicted RBP23.61■■□□□ 1.37
HOXB7-201ENST00000239165 ARPP19P56211 112 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 ARHGAP44Q17R89 818 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 CCDC142Q17RM4 750 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 PALB2Q86YC2 1186 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 VSTM4Q8IW00 320 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 C12orf76Q8N812 135 aaPredicted RBP23.61■■□□□ 1.37
HOXB7-201ENST00000239165 RBBP8NLQ8NC74 664 aaPredicted RBP23.61■■□□□ 1.37
HOXB7-201ENST00000239165 PCED1BQ96HM7 432 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 MRFAP1L1Q96HT8 127 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 NECTIN4Q96NY8 510 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 TRIM5Q9C035 493 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 PLEKHA4Q9H4M7 779 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 KIAA1257Q9ULG3 409 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 MYO6Q9UM54 1294 aa23.61■■□□□ 1.37
HOXB7-201ENST00000239165 A0A1W2PQJ5 194 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 TRIM21P19474 475 aaKnown RBP23.6■■□□□ 1.37
HOXB7-201ENST00000239165 RAPGEF1Q13905 1077 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 ZNF394Q53GI3 561 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 MDH1BQ5I0G3 518 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 RARS2Q5T160 578 aaKnown RBP23.6■■□□□ 1.37
HOXB7-201ENST00000239165 C4orf50Q6ZRC1 276 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 BAP1Q92560 729 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 EDAQ92838 391 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 MYLPFQ96A32 169 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 DPP7Q9UHL4 492 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 PCDHB5Q9Y5E4 795 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 PLXNA3P51805 1871 aa23.6■■□□□ 1.37
HOXB7-201ENST00000239165 MTHFRP42898 656 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 ORC1Q13415 861 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 ARHGAP17Q68EM7 881 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 PAQR9Q6ZVX9 377 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 ATAD1Q8NBU5 361 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 KREMEN2Q8NCW0 462 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 HNRNPABQ99729 332 aaKnown RBP23.59■■□□□ 1.37
HOXB7-201ENST00000239165 CRISPLD1Q9H336 500 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 POMKQ9H5K3 350 aa23.59■■□□□ 1.37
HOXB7-201ENST00000239165 VDRP11473 427 aa23.58■■□□□ 1.37
HOXB7-201ENST00000239165 MAGEA11P43364 429 aa23.58■■□□□ 1.37
HOXB7-201ENST00000239165 ZNF75DP51815 510 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms