RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 NIPA2Q8N8Q9 360 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 TRAPPC12Q8WVT3 735 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 ZNF606Q8WXB4 792 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 HEMGNQ9BXL5 484 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 PTPRJQ12913 1337 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 COL1A2P08123 1366 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 LRRIQ4A6NIV6 560 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 TCP11X1B4DZS4 312 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 ADCY3O60266 1144 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 GJB6O95452 261 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 CALCAP01258 141 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 MAGEA4P43358 317 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 ARHGEF6Q15052 776 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 SPOPLQ6IQ16 392 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 GSTA5Q7RTV2 222 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 CCDC63Q8NA47 563 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 TMEM35BQ8NCS4 154 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 SLITRK1Q96PX8 696 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 HAPLN2Q9GZV7 340 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 KCNK9Q9NPC2 374 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 NAALADL1Q9UQQ1 740 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 NUB1Q9Y5A7 615 aa26.24■■□□□ 1.79
RUNDC3A-201ENST00000225441 SEPT4O43236 478 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 ASS1P00966 412 aaKnown RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 CDH5P33151 784 aaPredicted RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 MORF4L2Q15014 288 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 TRIP13Q15645 432 aaPredicted RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 GALNTL6Q49A17 601 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 LMBRD2Q68DH5 695 aaPredicted RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 A0A1B0GUA9 196 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 F2P00734 622 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 WNT7BP56706 349 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 CCDC142Q17RM4 750 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 IER5Q5VY09 327 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 ALLCQ8N6M5 410 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 RAET1EQ8TD07 263 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 TCP11Q8WWU5 503 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 NKD2Q969F2 451 aaPredicted RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 RBM15Q96T37 977 aaKnown RBP eCLIP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 TARS2Q9BW92 718 aaKnown RBP26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 PCDHGC3Q9UN70 934 aa26.23■■□□□ 1.79
RUNDC3A-201ENST00000225441 TCRBV5S1A1TA0A578 114 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 C22orf31O95567 290 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 HMGCRP04035 888 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 PRKAR2AP13861 404 aaKnown RBP26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 STX2P32856 288 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 YWHAEP62258 255 aaKnown RBP26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 FSCN1Q16658 493 aaKnown RBP26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 WLSQ5T9L3 541 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 ELMO3Q96BJ8 720 aa26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 TPX2Q9ULW0 747 aaKnown RBP26.22■■□□□ 1.79
RUNDC3A-201ENST00000225441 EIF4BP23588 611 aaKnown RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 IGBP1P78318 339 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 ELF3P78545 371 aaPredicted RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 BEX3Q00994 111 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 IL9RQ01113 521 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 MKRN4PQ13434 485 aaPredicted RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 SGSM1Q2NKQ1 1148 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 PREPLQ4J6C6 727 aaPredicted RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 SPATA21Q7Z572 469 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 POLNQ7Z5Q5 900 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 PCGF5Q86SE9 256 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 PXYLP1Q8TE99 480 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 MAML1Q92585 1016 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 FAXDC2Q96IV6 333 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 PRKAG3Q9UGI9 489 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 FETUBQ9UGM5 382 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 ITGAVP06756 1048 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 SSR1P43307 286 aaKnown RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 GJA9P57773 515 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 CCDC15Q0P6D6 951 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 LLGL1Q15334 1064 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 P3H1Q32P28 736 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 RNF43Q68DV7 783 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 DNAJC24Q6P3W2 148 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 PASD1Q8IV76 773 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 LRRC71Q8N4P6 559 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 ZBTB45Q96K62 511 aaPredicted RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 UPF3AQ9H1J1 476 aaKnown RBP26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 STRIP2Q9ULQ0 834 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 SHOC2Q9UQ13 582 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 USTQ9Y2C2 406 aa26.21■■□□□ 1.79
RUNDC3A-201ENST00000225441 MAGEB2O15479 319 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 PRPF4O43172 522 aaKnown RBP eCLIP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 MYL3P08590 195 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 CD58P19256 250 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 CCND3P30281 292 aaPredicted RBP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 GSCP56915 257 aaPredicted RBP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 NUGGCQ68CJ6 796 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 SPOCD1Q6ZMY3 1216 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 RGS9BPQ6ZS82 235 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 PRPF31Q8WWY3 499 aaKnown RBP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 MRPL4Q9BYD3 311 aaKnown RBP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 FGFR1OP2Q9NVK5 253 aa26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 SMG5Q9UPR3 1016 aaKnown RBP26.2■■□□□ 1.78
RUNDC3A-201ENST00000225441 FAM47DPA6NHR8 397 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 SMAPO00193 183 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 TOM1L1O75674 476 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 KRT1P04264 644 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 CFHP08603 1231 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms