RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SLCO1B3Q9NPD5 702 aa16.74■□□□□ 0.27
SF3A2-201ENST00000221494 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
SF3A2-201ENST00000221494 STX18Q9P2W9 335 aaKnown RBP16.74■□□□□ 0.27
SF3A2-201ENST00000221494 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
SF3A2-201ENST00000221494 POLIQ9UNA4 740 aa16.74■□□□□ 0.27
SF3A2-201ENST00000221494 EME2A4GXA9 379 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 ENO4A6NNW6 628 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 CCND2P30279 289 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 KLHL38Q2WGJ6 581 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 Q3C1V9 767 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 ZNF449Q6P9G9 518 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 MTHFD1LQ6UB35 978 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 CHSY1Q86X52 802 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PHF13Q86YI8 300 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PPFIBP2Q8ND30 876 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 NSL1Q96IY1 281 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 TSPAN18Q96SJ8 248 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 DHRS4Q9BTZ2 278 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 R3HDMLQ9H3Y0 253 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PDP2Q9P2J9 529 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 CBX6O95503 412 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 ATP5BP06576 529 aaKnown RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 VPS41P49754 854 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 AP1B1Q10567 949 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 KPNB1Q14974 876 aaKnown RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 SLC1A5Q15758 541 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PLEKHA7Q6IQ23 1121 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 LVRNQ6Q4G3 990 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 ARMCX6Q7L4S7 300 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 BICD1Q96G01 975 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 PWWP2AQ96N64 755 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 NR1H4Q96RI1 486 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-201ENST00000221494 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 C1orf112Q9NSG2 853 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 DNAJB4Q9UDY4 337 aa16.73■□□□□ 0.27
SF3A2-201ENST00000221494 MAGEA13PA6NCF6 341 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 ITGAVP06756 1048 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 RAB27AP51159 221 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 GTF2A2P52657 109 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
SF3A2-201ENST00000221494 PDCD2Q16342 344 aaPredicted RBP16.72■□□□□ 0.27
SF3A2-201ENST00000221494 RNASEH2BQ5TBB1 312 aaKnown RBP16.72■□□□□ 0.27
SF3A2-201ENST00000221494 OR52E8Q6IFG1 317 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 NCAPG2Q86XI2 1143 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 SMC1BQ8NDV3 1235 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 TTC8Q8TAM2 541 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 CADM1Q9BY67 442 aaKnown RBP16.72■□□□□ 0.27
SF3A2-201ENST00000221494 C17orf75Q9HAS0 396 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 WDR35Q9P2L0 1181 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
SF3A2-201ENST00000221494 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 F8W8V4 182 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ATP9AO75110 1047 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ENTPD5O75356 428 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 RGS20O76081 388 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SLC25A27O95847 323 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 GNAT1P11488 350 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 KRT5P13647 590 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SH3BGRP55822 239 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 INHBEP58166 350 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CNTN2Q02246 1040 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CDK18Q07002 472 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SEPT7Q16181 437 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SNX30Q5VWJ9 437 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 DAB2IPQ5VWQ8 1189 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ADGRD1Q6QNK2 874 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CBWD2Q8IUF1 395 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ATP11CQ8NB49 1132 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 DNERQ8NFT8 737 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SPOCK2Q92563 424 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ZBTB10Q96DT7 871 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 MIPEPQ99797 713 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 TBC1D22BQ9NU19 505 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 TISP43B9A030 160 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 GSC2O15499 205 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CYP2C8P10632 490 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CYP24A1Q07973 514 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 DYNC1I2Q13409 638 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 LRRC74BQ6ZQY2 392 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 MTDHQ86UE4 582 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 C4orf19Q8IY42 314 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 TAS1R2Q8TE23 839 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 SPIRE2Q8WWL2 714 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 STMN2Q93045 179 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms