RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 PPP1R15BQ5SWA1 713 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 SLC39A5Q6ZMH5 540 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ASIC3Q9UHC3 531 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
RIPK3-201ENST00000216274 KRT1P04264 644 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 PTPN7P35236 360 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 GJC1P36383 396 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 GRM5P41594 1212 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 RAD23BP54727 409 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 GSCP56915 257 aaPredicted RBP13.53□□□□□ -0.24
RIPK3-201ENST00000216274 LMNB2Q03252 620 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 KLF1Q13351 362 aaPredicted RBP13.53□□□□□ -0.24
RIPK3-201ENST00000216274 SNX1Q13596 522 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 SLC10A6Q3KNW5 377 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 WDTC1Q8N5D0 677 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 OR2W6PQ8NHA6 318 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 DPF3Q92784 378 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 SNF8Q96H20 258 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 STARD7Q9NQZ5 370 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 CHST7Q9NS84 486 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 DERAQ9Y315 318 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 SCN10AQ9Y5Y9 1956 aa13.53□□□□□ -0.24
RIPK3-201ENST00000216274 A0A1B0GUA9 196 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 CILPO75339 1184 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 GJB6O95452 261 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 VDRP11473 427 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 RARGP13631 454 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 ATF2P15336 505 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 RAP1GAPP47736 663 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.24
RIPK3-201ENST00000216274 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.24
RIPK3-201ENST00000216274 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.24
RIPK3-201ENST00000216274 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 HPDLQ96IR7 371 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 CCDC114Q96M63 670 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 GCOM2Q9BZD3 368 aaPredicted RBP13.52□□□□□ -0.24
RIPK3-201ENST00000216274 SDCBP2Q9H190 292 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.24
RIPK3-201ENST00000216274 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
RIPK3-201ENST00000216274 CDR1P51861 262 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 RPL7AP62424 266 aaKnown RBP13.52□□□□□ -0.25
RIPK3-201ENST00000216274 BEX3Q00994 111 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.25
RIPK3-201ENST00000216274 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 TRMT10CQ7L0Y3 403 aaKnown RBP13.52□□□□□ -0.25
RIPK3-201ENST00000216274 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 CXorf38Q8TB03 319 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 CCHCR1Q8TD31 782 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 HEMGNQ9BXL5 484 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 MIS12Q9H081 205 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 DPP3Q9NY33 737 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 KIAA1257Q9ULG3 409 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
RIPK3-201ENST00000216274 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 TJP3O95049 919 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 PSMC1P62191 440 aaKnown RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 IRX5P78411 483 aaPredicted RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ZNF252P-AS1Q0IIN9 211 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 PRPF38BQ5VTL8 546 aaKnown RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 DAB2IPQ5VWQ8 1189 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 CEP128Q6ZU80 1094 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ATG4AQ8WYN0 398 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 TMEM109Q9BVC6 243 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 R3HDM2Q9Y2K5 976 aaKnown RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 GRIN2DO15399 1336 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 O00370 1275 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 MICAL2O94851 1124 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 KRT3P12035 628 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 PSMA2P25787 234 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 CDH8P55286 799 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 PURAQ00577 322 aaKnown RBP13.51□□□□□ -0.25
RIPK3-201ENST00000216274 ADCY2Q08462 1091 aa13.51□□□□□ -0.25
RIPK3-201ENST00000216274 LLGL1Q15334 1064 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms