RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NEU2Q9Y3R4 380 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 FDX1P10109 184 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 CASP5P51878 434 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 RPS6P62753 249 aaKnown RBP12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 MTMR2Q13614 643 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 XKR3Q5GH77 459 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF662Q6ZS27 426 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 DPP9Q86TI2 863 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 KLC2Q9H0B6 622 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 RNPEPL1Q9HAU8 725 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 RHPN2Q8IUC4 686 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 LPAR1Q92633 364 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 TMEM237Q96Q45 408 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 PHACTR1Q9C0D0 580 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 KIAA1551Q9HCM1 1747 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 STRNO43815 780 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 APOA1P02647 267 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 RALAP11233 206 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 ATXN3P54252 364 aaPredicted RBP12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 HMGCS2P54868 508 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 MCL1Q07820 350 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 EPS8L3Q8TE67 593 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 CEP19Q96LK0 163 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 CNBD2Q96M20 576 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 SEMA4AQ9H3S1 761 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 ACAD9Q9H845 621 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 SMYD2Q9NRG4 433 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 IL1RAPL1Q9NZN1 696 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 SENP1Q9P0U3 644 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 KRT38O76015 456 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 CAPN1P07384 714 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 KRT3P12035 628 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 IREB2P48200 963 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 NCOA4Q13772 614 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 LRRC8BQ6P9F7 803 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 RAPH1Q70E73 1250 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 MRPL4Q9BYD3 311 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 NAV1Q8NEY1 1877 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 IRF6O14896 467 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 ZBTB39O15060 712 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 GZMAP12544 262 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 RARGP13631 454 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 FNTAP49354 379 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 PEX5P50542 639 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 GPC3P51654 580 aa12.67□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM47DPA6NHR8 397 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SLITRK3O94933 977 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 LCA5LO95447 670 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 MAGEA4P43358 317 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 ALDH18A1P54886 795 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 PTENP60484 403 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TRAF7Q6Q0C0 670 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 ZFPM1Q8IX07 1006 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 ATP8B4Q8TF62 1192 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 DCUN1D5Q9BTE7 237 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 GDF3Q9NR23 364 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 STX18Q9P2W9 335 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 EML1O00423 815 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 PAX3P23760 479 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 MTTPP55157 894 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM102AQ5T9C2 384 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 NT5DC3Q86UY8 548 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 RNF149Q8NC42 400 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 EME1Q96AY2 570 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM167AQ96KS9 214 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 POP1Q99575 1024 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 MARCOQ9UEW3 520 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 OCM2P0CE71 109 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 CYP11B1P15538 503 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 KCNA4P22459 653 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SLC12A3P55017 1021 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 CDH6P55285 790 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 BCAR1P56945 870 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms