RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Serac1Q3U213 654 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Mapre1Q61166 268 aaKnown RBP21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cntn2Q61330 1040 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Anp32cQ64G17 123 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 RbfaQ6P3B9 350 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 DstykQ6XUX1 927 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Neto2Q8BNJ6 525 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 ClasrpQ8CFC7 668 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Tpgs1Q99MS8 303 aa21.08■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cacna2d1O08532 1103 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 PargO88622 969 aaKnown RBP21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Fermt1P59113 677 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Olfr8Q60892 310 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Zfyve28Q6ZPK7 905 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Q8CD60 292 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Stap2Q8R0L1 411 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ergic2Q9CR89 377 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Smc1aQ9CU62 1233 aaKnown RBP21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Acbd6Q9D061 282 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ttyh1Q9D3A9 450 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Fam217aQ9D9W6 419 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Nmnat1Q9EPA7 285 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cyp39a1Q9JKJ9 470 aa21.07■□□□□ 0.96
Lig3-204ENSMUST00000131537 Atg2aQ6P4T0 1914 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ighv11-2A0A075B5R8 117 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Scgb2b11A0A087WR49 112 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Zfp384E9Q1A5 584 aaKnown RBP21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gm3642K7N6V4 267 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Tpm3P21107 285 aaKnown RBP21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Anxa5P48036 319 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gad1P48318 593 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Lamb3Q61087 1168 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Casd1Q7TN73 797 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Bola2Q8BGS2 86 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 BoraQ8BS90 525 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Pdcd2lQ8C5N5 364 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Lrrc45Q8CIM1 670 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 BbxQ8VBW5 907 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 Uchl3Q9JKB1 230 aa21.06■□□□□ 0.96
Lig3-204ENSMUST00000131537 0610012G03RikA0A0J9YTR2 95 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gm5485A0A1D5RM98 91 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 PurbO35295 324 aaKnown RBP21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Odc1P00860 461 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 CkbQ04447 381 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Traf3Q60803 567 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cd6Q61003 665 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Nlrp14Q6B966 993 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cpa4Q6P8K8 420 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Tas2r115Q7M719 310 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 WtipQ7TQJ8 398 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 WhrnQ80VW5 918 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Maip1Q8BHE8 291 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Mei4Q8BRM6 389 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Kremen2Q8K1S7 461 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Trim68Q8K243 485 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Snx9Q91VH2 595 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Calml4Q91WQ9 153 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Klhl40Q9D783 621 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Rnf225Q9D7D1 332 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Q9D9D9 101 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Umodl1Q5DID3 1319 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Zfp990B1AVN5 605 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Farp1F8VPU2 1048 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Dpysl4O35098 572 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gucy1b3O54865 620 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Stat4P42228 749 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 SftpdP50404 374 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Polr2fP61219 127 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Lhx5P61375 402 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Hoxd13P70217 339 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 GmipQ6PGG2 971 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Trit1Q80UN9 467 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Bank1Q80VH0 783 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Q80ZQ3 298 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ankrd45Q810N6 248 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Fam43aQ8BUP8 424 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Chordc1Q9D1P4 331 aaKnown RBP21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Desi2Q9D291 194 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Pak1ip1Q9DCE5 382 aaKnown RBP21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Il17rbQ9JIP3 499 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Noa1Q9JJG9 693 aaKnown RBP21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Psma7Q9Z2U0 248 aa21.05■□□□□ 0.96
Lig3-204ENSMUST00000131537 Mup13L7N222 235 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ctnnal1O88327 731 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cxcl12P40224 93 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gsdmc2Q2KHK6 480 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gsdmc4Q3TR54 480 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Sema5aQ62217 1077 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Fnip1Q68FD7 1165 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Znf512Q69Z99 562 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Cep70Q6IQY5 616 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Asic3Q6X1Y6 530 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Nucks1Q80XU3 234 aaKnown RBP21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 MtrrQ8C1A3 696 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Kctd12bQ8C7J6 292 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Gsdmc3Q8CB12 480 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Commd10Q8JZY2 202 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Rassf9Q8K342 435 aa21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Uhrf1Q8VDF2 782 aaKnown RBP21.04■□□□□ 0.96
Lig3-204ENSMUST00000131537 Ier5lQ99J55 406 aa21.04■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms