RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Spred2Q924S7 410 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Dpp3Q99KK7 738 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Fuca2Q99KR8 461 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rpa3Q9CQ71 121 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 CactinQ9CS00 772 aaKnown RBP22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Vmn1r65Q9EPS7 332 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Lama3Q61789 3330 aa22.35■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gm13276A0A087WR18 182 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Cyp2b23E9Q593 491 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Pex5O09012 639 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Edil3O35474 480 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 TyrobpO54885 114 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gabrb2P63137 512 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Atp1a2Q6PIE5 1020 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Olfr1105Q7TR58 312 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ppm1eQ80TL0 749 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gtf2a2Q80ZM7 109 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Wbp1lQ8BGW2 348 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Creb3l2Q8BH52 521 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Nipal1Q8BMW7 416 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Neu4Q8BZL1 478 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ace2Q8R0I0 805 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Vwa1Q8R2Z5 415 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ppp2r2dQ925E7 453 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Thap12Q9CUX1 758 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Fam212aQ9CX62 282 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Acbd6Q9D061 282 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 DpysQ9EQF5 519 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Tldc2A2ACG1 198 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mocs3A2BDX3 460 aaKnown RBP22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Flt3Q00342 1000 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gpr15Q0VDU3 360 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Tbc1d12Q6A039 696 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Daam2Q80U19 1115 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Map3k11Q80XI6 850 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ccdc87Q8CDL9 855 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Spata2Q8K004 515 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Usp15Q8R5H1 981 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 SfpqQ8VIJ6 699 aaKnown RBP22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Afg3l1Q920A7 789 aaKnown RBP22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Angptl3Q9R182 455 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Trpv2Q9WTR1 756 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Anapc7Q9WVM3 565 aa22.34■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Myh10Q61879 1976 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gm1661E9Q963 441 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 XntrpcF8VQM8 1264 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Gm6121L7MUF1 212 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Adam15O88839 864 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mdh1P14152 334 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 IhhP97812 411 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 ArvcfP98203 962 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rplp2P99027 115 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Hdgfl1Q2VPR5 283 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Q3TQQ9 903 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 PomkQ3TUA9 349 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Dzip1lQ499E4 774 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Acvrl1Q61288 502 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Dnajc16Q80TN4 772 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Polr2eQ80UW8 210 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Q8BGD0 127 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Kank2Q8BX02 843 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Q8BZE1 841 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Champ1Q8K327 802 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 DutQ8VCG1 200 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Olfr1352Q8VGX5 309 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Mob2Q8VI63 235 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Rrp9Q91WM3 475 aaKnown RBP22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Q9CQC3 228 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Kank3Q9Z1P7 791 aa22.33■■□□□ 1.17
Ccdc88a-202ENSMUST00000109477 Ms4a14A0A087WSD2 1232 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Actn3O88990 900 aaKnown RBP22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Slc10a3P21129 473 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 B3gat3P58158 335 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Zbtb17Q60821 794 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tcp10aQ80W76 438 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Zdhhc19Q810M5 347 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Anapc5Q8BTZ4 740 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fam43aQ8BUP8 424 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Crlf2Q8CII9 359 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Pcdhb2Q91Y00 799 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Mrpl4Q9DCU6 294 aaKnown RBP22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Nr1h3Q9Z0Y9 445 aa22.32■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gm3002E9PW72 216 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gm3371F7CQW8 167 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Pax3P24610 479 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 DmwdQ08274 665 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Trim21Q62191 470 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Scube3Q66PY1 993 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Dars2Q8BIP0 653 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Mcrs1Q99L90 462 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Thumpd2Q9CZB3 528 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Capn12Q9ER56 720 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fbf1A2A870 1173 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Znf804aA2AKY4 1200 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Olfr1305A2AVW3 312 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Zfp990B1AVN5 605 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gm5160F8VPN3 147 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 H2afxP27661 143 aaKnown RBP22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 DsppP97399 934 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Smcr8Q3UMB5 935 aa22.31■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms