RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Srbd1Q497V5 1015 aaKnown RBP10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tcf12Q61286 706 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Atg16l2Q6KAU8 623 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Hmgb4Q6P8W9 181 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tmc4Q7TQ65 694 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 MtrrQ8C1A3 696 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ndufa10Q99LC3 355 aaKnown RBP10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ccdc8D3YZV8 685 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Card6E9PWH2 1175 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Samsn1P57725 372 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cyfip2Q5SQX6 1253 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Atl2Q6PA06 583 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ube2oQ6ZPJ3 1288 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Lrrc75bQ7TPD7 306 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rps6ka6Q7TPS0 764 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Npm3Q9CPP0 175 aaKnown RBP10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Dlgap1Q9D415 992 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 RhoaQ9QUI0 193 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pola2P33611 600 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Slc30a9Q5IRJ6 567 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Znf280dQ68FE8 974 aa10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Znf618Q80YY7 953 aaKnown RBP10.82□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ankfn1A0A140LIW7 1083 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cyp3a59D3Z2W7 503 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 H6pdQ8CFX1 789 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Serpina3cP29621 417 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rab6bP61294 208 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Olfr832Q7TRG9 312 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 A430089I19RikQ8C9W1 407 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rbm42Q91V81 474 aaKnown RBP10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Hspa12bQ9CZJ2 685 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ddit4Q9D3F7 229 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Spag6Q9JLI7 507 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Aldh1a7O35945 501 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Lpar1P61793 364 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Apba2P98084 750 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Q8CC96 669 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cul3Q9JLV5 768 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Gjb6P70689 261 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Spag6Q3V0U9 509 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Psmd5Q8BJY1 504 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Eif3lQ8QZY1 564 aaKnown RBP10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Stx18Q8VDS8 334 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 ChiaQ91XA9 473 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ift46Q9DB07 301 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Xpo7Q9EPK7 1087 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Krt6bQ9Z331 562 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 HmgcrQ01237 887 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 ScinQ60604 715 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Krt31Q61765 416 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 RhocQ62159 193 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Dsg1bQ7TSF1 1060 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Susd6Q8BGE4 302 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Homer3Q99JP6 356 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Trim33Q99PP7 1142 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Trim13Q9CYB0 407 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Calr3Q9D9Q6 380 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Golga4Q91VW5 2238 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 RptorQ8K4Q0 1335 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Serpina3jD3Z451 420 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Psmb9P28076 219 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 IdsQ08890 552 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Map3k15A2AQW0 1331 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Runx1t1Q61909 577 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Sf1Q64213 653 aaKnown RBP10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Tcaf3Q6QR59 914 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Arl8aQ8VEH3 186 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cables1Q9ESJ1 568 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Kdm6bQ5NCY0 1641 aa10.81□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cyp2b19O55071 492 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Fgfr1P16092 822 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Slc2a13Q3UHK1 637 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Hif1aQ61221 836 aaKnown RBP10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Akr1c20Q8VC77 323 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Psma8Q9CWH6 250 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 A430078G23RikE9Q7Y4 484 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Vmn2r1O70410 912 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Rap1gap2Q5SVL6 712 aaKnown RBP10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ptk6Q64434 451 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Gpr150Q8BL07 427 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Abcg4Q91WA9 646 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Clca1Q9D7Z6 913 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Cbx8Q9QXV1 362 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Ccndbp1Q3TVC7 356 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Btbd7Q8CFE5 1130 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pcdha5Q91Y15 934 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 TarsQ9D0R2 722 aaKnown RBP10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 CoblQ5NBX1 1337 aaKnown RBP10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pid1Q3UBG2 217 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Pgm5Q8BZF8 567 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Usp44Q8C2S0 711 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 DmgdhQ9DBT9 869 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Extl2Q9ES89 330 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Adgrf5G5E8Q8 1348 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 FanceB8JJD6 213 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Zfp358E9Q8M1 571 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Srp72F8VQC1 671 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 RpsaP14206 295 aaKnown RBP10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Teddm1aQ810U2 305 aa10.8□□□□□ -0.68
Scn9a-201ENSMUST00000100063 Mief1Q8BGV8 463 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms