RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Pabpn1lQ5XFR0 273 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gigyf2Q6Y7W8 1291 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ush1gQ80T11 461 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rbm12b1Q80YR9 836 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Neto2Q8BNJ6 525 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Slc9a9Q8BZ00 644 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Coq6Q8R1S0 476 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Vmn1r64Q8R2B8 320 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Itm2cQ91VK4 269 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Dnajc9Q91WN1 259 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rpn1Q91YQ5 608 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Pde6cQ91ZQ1 861 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ivns1abpQ920Q8 642 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rin1Q921Q7 763 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Zfp64Q99KE8 643 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 AticQ9CWJ9 592 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Zfp623Q9CY99 499 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rab11fip1Q9D620 645 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Noa1Q9JJG9 693 aaKnown RBP7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Nupr1Q9WTK0 80 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Cib2Q9Z309 187 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Atad5Q4QY64 1826 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Pds5aQ6A026 1332 aa7.52□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Arrdc4A0A0B4J1F4 415 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Arhgap42B2RQE8 841 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Morc3F7BJB9 942 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Kbtbd2G3X9X1 623 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Clk2O35491 499 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Alkbh1P0CB42 389 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Kcnn2P58390 839 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Kpnb1P70168 876 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Cdk16Q04735 496 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gpsm3Q3U1Z5 159 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 B3gnt3Q5JCS9 372 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 RilpQ5ND29 369 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Tpd52Q62393 224 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Utp14bQ6EJB6 756 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Klhl23Q6GQU2 558 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Vat1lQ80TB8 417 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Tspan18Q80WR1 248 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Sec24bQ80ZX0 1251 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Znf784Q8BI69 297 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Chmp2bQ8BJF9 213 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ccser1Q8C0C4 895 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 A430089I19RikQ8C9W1 407 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Mamdc2Q8CG85 686 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Stoml1Q8CI66 399 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Mta1Q8K4B0 715 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Spon1Q8VCC9 807 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 AmotQ8VHG2 1126 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Foxp3Q99JB6 429 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Arl8bQ9CQW2 186 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Serpina9Q9D7D2 418 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Tbx20Q9ES03 445 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Dclre1aQ9JIC3 1026 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 JmyQ9QXM1 983 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Spata31d1aE9QA35 1336 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gm7086A0A1W2P766 342 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Zc3h7aE9PWW6 970 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gm5795E9PZN8 263 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gm1661E9Q963 441 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Zfp105G3X9I0 524 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 HunkO88866 714 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Irf8P23611 424 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 St3gal1P54751 337 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 RenbpP82343 430 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 SelpQ01102 768 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Mark3Q03141 753 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Atp13a5Q3TYU2 1216 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Srebf2Q3U1N2 1130 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Nat8lQ3UGX3 299 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 KizQ3UXL4 695 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Fam189a2Q4FZH1 290 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gm5168Q4KL04 211 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Etaa1Q5SVT3 877 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Cd180Q62192 661 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Atp4aQ64436 1033 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Gba2Q69ZF3 918 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ccdc117Q6PB51 277 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ssxb5Q6XAS2 159 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Crybg3Q80W49 1005 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Entpd3Q8BFW6 529 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 B3glctQ8BHT6 489 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rcn2Q8BP92 320 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Cfap36Q8C6E0 343 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Lrif1Q8CDD9 755 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Snx30Q8CE50 437 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 4921504E06RikQ8CET2 560 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Pex19Q8VCI5 299 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Rtfdc1Q99K95 307 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Usp26Q99MX1 835 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Trmt10bQ9D075 318 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Slc15a2Q9ES07 729 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Sfmbt1Q9JMD1 863 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Abt1Q9QYL7 269 aaKnown RBP7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Ror2Q9Z138 944 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Col11a1Q61245 1804 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Zgrf1Q0VGT4 1863 aa7.51□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Mmrn2A6H6E2 943 aa7.5□□□□□ -1.21
Clrn1-202ENSMUST00000055636 Timm44O35857 452 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms