RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Clca1Q9D7Z6 913 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tm9sf1Q9DBU0 606 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ParvbQ9ES46 365 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plod1Q9R0E2 728 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ahnak2E9PYB0 1738 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Wdr72D3YYM4 1114 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 GclcP97494 637 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tmem237Q3V0J1 427 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ddx42Q810A7 929 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rd3Q8BRE0 195 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Snx17Q8BVL3 470 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Washc5Q8C2E7 1159 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Vps37aQ8CHS8 397 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Stx19Q8R1Q0 292 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rec114Q9CWH4 259 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Phtf1Q9QZ09 761 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm8113E0CXS8 587 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccdc62E9PVD1 701 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 IapP03975 557 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ptpn11P35235 597 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Abce1P61222 599 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lsg1Q3UM18 644 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Psg29Q3URN6 468 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Msantd2Q6NZR2 559 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Zdhhc17Q80TN5 632 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Trerf1Q8BXJ2 1205 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Trpv6Q91WD2 767 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ddx20Q9JJY4 825 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plekhg4A0A1L1SU27 1217 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 1700011I03RikE9PYL8 271 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm3402K7N5P2 326 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Il13ra2O88786 383 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hoxc6P10629 235 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 RargP18911 458 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Clcn3P51791 818 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Xlr3aQ60595 226 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Scd4Q6T707 353 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Entpd3Q8BFW6 529 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nim1kQ8BHI9 436 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pi4kbQ8BKC8 816 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slc9b1Q8C0X2 565 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Glra3Q91XP5 464 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 GzmnQ920S1 248 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 MutyhQ99P21 515 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CoprsQ9CQ13 173 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Terb2Q9D494 218 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Usp29Q9ES63 869 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Atp11cQ9QZW0 1129 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm3248K7N721 186 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hnrnph1O35737 449 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rag1P15919 1040 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lta4hP24527 611 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ptpn12P35831 775 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pon1P52430 355 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hmgcs2P54869 508 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PhexP70669 749 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dab2ipQ3UHC7 1189 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Myl6Q60605 151 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Xpo1Q6P5F9 1071 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Znf598Q80YR4 908 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rusc1Q8BG26 893 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Brat1Q8C3R1 822 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cwf19l1Q8CI33 537 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fam83aQ8K2P2 436 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Znf445Q8R2V3 986 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Asb7Q91ZU0 318 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Bco2Q99NF1 532 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Igf2bp3Q9CPN8 579 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dcaf6Q9DC22 876 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tbx20Q9ES03 445 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Edf1Q9JMG1 148 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Prdm12A2AJ77 365 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Spata31E9QAF0 1014 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Kcnu1O54982 1121 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tp53P02340 387 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sh3gl3Q62421 347 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plppr4Q7TME0 766 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Chn2Q80XD1 332 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 NemfQ8CCP0 1064 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cog3Q8CI04 820 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slc8a2Q8K596 921 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dpp3Q99KK7 738 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Angptl2Q9R045 493 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 1700017N19RikA0A087WPJ1 469 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cyp4f17G3UW78 524 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 C130060K24RikG3UWA8 416 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pold2O35654 469 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PolgP54099 1218 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rmdn3Q3UJU9 470 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hipk4Q3V016 616 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 FAM120AQ6A0A9 1112 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gramd1bQ80TI0 738 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lrrc8dQ8BGR2 859 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dnali1Q8BVN8 258 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CntrobQ8CB62 887 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 P3h2Q8CG71 703 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccdc137Q8R0K4 290 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plekha4Q8VC98 588 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Anxa13Q99JG3 317 aa10.72□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cyp4f16Q99N17 524 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms