RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Arid2E9Q7E2 1828 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Timm44O35857 452 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 RarbP22605 482 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Pms2P54279 859 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Tbc1d10aP58802 500 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Lhx5P61375 402 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 YwhaeP62259 255 aaKnown RBP19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Zscan2Q07230 614 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ttc9Q3V038 219 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Trim24Q64127 1051 aaKnown RBP19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mical2Q8BML1 960 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Polr2bQ8CFI7 1174 aaKnown RBP19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mcoln2Q8K595 566 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Atad5Q4QY64 1826 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Rtn2O70622 471 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Icam1P13597 537 aaKnown RBP19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Lta4hP24527 611 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Nos2P29477 1144 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Stmn1P54227 149 aaKnown RBP19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Psmc1P62192 440 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 PrkcbP68404 671 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Irf3P70671 419 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Gucy2fQ5SDA5 1108 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ssxb5Q6XAS2 159 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Acbd3Q8BMP6 525 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Naa25Q8BWZ3 972 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Nipal4Q8BZF2 406 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Syt15Q8C6N3 418 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Q8CD60 292 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mamdc2Q8CG85 686 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Pcdhb1Q91Y08 818 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Nt5c1bQ91YE9 573 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Dpp3Q99KK7 738 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Med10Q9CXU0 135 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Plscr2Q9DCW2 307 aa19.63■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Rap1gapA2ALS5 663 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Zfp94E9Q6Y4 486 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 GclmO09172 274 aaKnown RBP19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 CalrP14211 416 aaKnown RBP19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Rps12P63323 132 aaKnown RBP19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Spag6Q3V0U9 509 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Sh3tc2Q80VA5 1289 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 NfascQ810U3 1240 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Man2a2Q8BRK9 1152 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mrpl58Q8R035 206 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 YarsQ91WQ3 528 aaKnown RBP19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Rsrc1Q9DBU6 334 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Xpo7Q9EPK7 1087 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Hes6Q9JHE6 224 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Psmg1Q9JK23 289 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Cyth1Q9QX11 398 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Pck1Q9Z2V4 622 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ptpn3A2ALK8 913 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Zfp651E9PZ11 729 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mmp10O55123 476 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Eef1bO70251 225 aaKnown RBP19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Slc1a2P43006 572 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 VdrP48281 422 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 CiitaP79621 1155 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ccndbp1Q3TVC7 356 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Lrch2Q3UMG5 773 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Znf185Q62394 352 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Rab34Q64008 259 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 2700097O09RikQ6PGK3 301 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Chsy1Q6ZQ11 800 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Adgra1Q8C4G9 578 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Kctd12bQ8C7J6 292 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Trim68Q8K243 485 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Trpv6Q91WD2 767 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Tm9sf1Q9DBU0 606 aa19.62■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ccdc6D3YZP9 469 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 GmpsQ3THK7 693 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Slc17a7Q3TXX4 560 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Spa17Q62252 149 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 OcrlQ6NVF0 900 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Taf5Q8C092 801 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Cog3Q8CI04 820 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Dtnbp1Q91WZ8 352 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Xpo5Q924C1 1204 aaKnown RBP19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Apold1E9Q0X2 246 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 F6Y6L6 278 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Hoxc10P31257 342 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Eif3eP60229 445 aaKnown RBP19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 FerP70451 823 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Gprin1Q3UNH4 932 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Sh3rf1Q69ZI1 892 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Pdik1lQ8QZR7 341 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Vps37bQ8R0J7 285 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Olfr395Q8VGR3 312 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Slc39a3Q99K24 317 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Bzw1Q9CQC6 419 aaKnown RBP19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 PodxlQ9R0M4 503 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 SufuQ9Z0P7 484 aa19.61■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Tatdn2B7ZNL9 783 aaKnown RBP19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Ccdc13D3YV10 709 aa19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Per2O54943 1257 aa19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Srpk1O70551 648 aaKnown RBP19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Mxi1P50540 228 aa19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Tmem65Q4VAE3 234 aa19.6■□□□□ 0.73
Shkbp1-201ENSMUST00000003857 Olfr670Q7TRP3 312 aa19.6■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 95.7 ms