RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C RGI1P40043 161 aaPredicted RBP1.71□□□□□ -2.14
RPC40YPR110C APQ12P40532 138 aa1.71□□□□□ -2.14
RPC40YPR110C ERJ5P43613 295 aaPredicted RBP1.71□□□□□ -2.14
RPC40YPR110C YGL235WP53071 178 aa1.71□□□□□ -2.14
RPC40YPR110C PGA1P53896 198 aa1.71□□□□□ -2.14
RPC40YPR110C YNL033WP53964 284 aa1.71□□□□□ -2.14
RPC40YPR110C YNL019CP53975 284 aa1.71□□□□□ -2.14
RPC40YPR110C YDC1Q02896 317 aa1.71□□□□□ -2.14
RPC40YPR110C CUE4Q04201 117 aaPredicted RBP1.71□□□□□ -2.14
RPC40YPR110C SPC2Q04969 178 aa1.71□□□□□ -2.14
RPC40YPR110C YLR036CQ07986 203 aa1.71□□□□□ -2.14
RPC40YPR110C PET20Q99373 253 aa1.71□□□□□ -2.14
RPC40YPR110C YAR023CD6VPM8 179 aa1.7□□□□□ -2.14
RPC40YPR110C SEC11P15367 167 aa1.7□□□□□ -2.14
RPC40YPR110C SPO13P23624 291 aa1.7□□□□□ -2.14
RPC40YPR110C YGL010WP25338 174 aa1.7□□□□□ -2.14
RPC40YPR110C AHC2P25649 128 aa1.7□□□□□ -2.14
RPC40YPR110C SUI1P32911 108 aaKnown RBP1.7□□□□□ -2.14
RPC40YPR110C UPS2P35200 230 aa1.7□□□□□ -2.14
RPC40YPR110C PDX3P38075 228 aaKnown RBP1.7□□□□□ -2.14
RPC40YPR110C LSM1P47017 172 aaKnown RBP1.7□□□□□ -2.14
RPC40YPR110C NAT3Q06504 195 aa1.7□□□□□ -2.14
RPC40YPR110C YLR050CQ12155 161 aaKnown RBP1.7□□□□□ -2.14
RPC40YPR110C PHO85P17157 305 aa1.69□□□□□ -2.14
RPC40YPR110C YBR220CP38318 560 aa1.69□□□□□ -2.14
RPC40YPR110C GPI11Q06636 219 aa1.69□□□□□ -2.14
RPC40YPR110C CSI2Q08054 341 aa1.69□□□□□ -2.14
RPC40YPR110C YOL131WQ08270 108 aa1.69□□□□□ -2.14
RPC40YPR110C FLO9P39712 1322 aa1.68□□□□□ -2.14
RPC40YPR110C YOL162WP0CF19 215 aa1.68□□□□□ -2.14
RPC40YPR110C YCR023CP25351 611 aa1.68□□□□□ -2.14
RPC40YPR110C LHP1P33399 275 aaKnown RBP1.68□□□□□ -2.14
RPC40YPR110C YKR045CP36138 183 aa1.68□□□□□ -2.14
RPC40YPR110C NVJ1P38881 321 aa1.68□□□□□ -2.14
RPC40YPR110C RPL13BP40212 199 aaKnown RBP1.68□□□□□ -2.14
RPC40YPR110C PAC10P48363 199 aa1.68□□□□□ -2.14
RPC40YPR110C SBH2P52871 88 aa1.68□□□□□ -2.14
RPC40YPR110C HSK3P69852 69 aa1.68□□□□□ -2.14
RPC40YPR110C YMR099CQ03161 297 aaKnown RBP1.68□□□□□ -2.14
RPC40YPR110C YPR127WQ06494 345 aa1.68□□□□□ -2.14
RPC40YPR110C YOL014WQ08110 124 aa1.68□□□□□ -2.14
RPC40YPR110C RAD28Q12021 506 aa1.68□□□□□ -2.14
RPC40YPR110C YOR342CQ12182 319 aa1.68□□□□□ -2.14
RPC40YPR110C MPD1Q12404 318 aaKnown RBP1.68□□□□□ -2.14
RPC40YPR110C RPL13AQ12690 199 aaPredicted RBP1.68□□□□□ -2.14
RPC40YPR110C MHF2Q3E829 80 aa1.68□□□□□ -2.14
RPC40YPR110C POL2P21951 2222 aaKnown RBP1.67□□□□□ -2.14
RPC40YPR110C RPS28BP0C0X0 67 aaKnown RBP1.67□□□□□ -2.14
RPC40YPR110C RPS1BP23248 255 aaKnown RBP1.67□□□□□ -2.14
RPC40YPR110C UBC8P28263 218 aa1.67□□□□□ -2.14
RPC40YPR110C NUF2P33895 451 aa1.67□□□□□ -2.14
RPC40YPR110C SRP102P36057 244 aaPredicted RBP1.67□□□□□ -2.14
RPC40YPR110C MRPL15P36523 253 aa1.67□□□□□ -2.14
RPC40YPR110C SLM6P38343 150 aa1.67□□□□□ -2.14
RPC40YPR110C MPM1P40364 252 aa1.67□□□□□ -2.14
RPC40YPR110C YIL086CP40503 102 aa1.67□□□□□ -2.14
RPC40YPR110C RPS12P48589 143 aaKnown RBP1.67□□□□□ -2.14
RPC40YPR110C VMA10P48836 114 aaKnown RBP1.67□□□□□ -2.14
RPC40YPR110C NQM1P53228 333 aaPredicted RBP1.67□□□□□ -2.14
RPC40YPR110C AIM34Q03673 198 aa1.67□□□□□ -2.14
RPC40YPR110C YDL180WQ12301 547 aa1.67□□□□□ -2.14
RPC40YPR110C RDI1Q12434 202 aa1.67□□□□□ -2.14
RPC40YPR110C YLR412C-AQ3E742 68 aa1.67□□□□□ -2.14
RPC40YPR110C RPS28AQ3E7X9 67 aaPredicted RBP1.67□□□□□ -2.14
RPC40YPR110C YPR014CQ6B0W2 109 aa1.67□□□□□ -2.14
RPC40YPR110C YML100W-AQ8TGT0 57 aa1.67□□□□□ -2.14
RPC40YPR110C RPL2AP0CX45 254 aaKnown RBP1.66□□□□□ -2.14
RPC40YPR110C RPL2BP0CX46 254 aaKnown RBP1.66□□□□□ -2.14
RPC40YPR110C RPS27AP35997 82 aaKnown RBP1.66□□□□□ -2.14
RPC40YPR110C RPS27BP38711 82 aa1.66□□□□□ -2.14
RPC40YPR110C RIO2P40160 425 aaKnown RBP1.66□□□□□ -2.14
RPC40YPR110C SOK1P40317 901 aa1.66□□□□□ -2.14
RPC40YPR110C YGR201CP42936 225 aa1.66□□□□□ -2.14
RPC40YPR110C YFL019CP43576 117 aa1.66□□□□□ -2.14
RPC40YPR110C SHH3Q04487 196 aa1.66□□□□□ -2.14
RPC40YPR110C YSF3P0C074 85 aaPredicted RBP1.65□□□□□ -2.15
RPC40YPR110C RPL40AP0CH08 128 aaKnown RBP1.65□□□□□ -2.15
RPC40YPR110C RPL40BP0CH09 128 aaKnown RBP1.65□□□□□ -2.15
RPC40YPR110C TIR1P10863 254 aa1.65□□□□□ -2.15
RPC40YPR110C ALB1P47019 175 aaPredicted RBP1.65□□□□□ -2.15
RPC40YPR110C SOL1P50278 321 aa1.65□□□□□ -2.15
RPC40YPR110C MPA43P53583 542 aaPredicted RBP1.65□□□□□ -2.15
RPC40YPR110C VPS71Q03433 280 aa1.65□□□□□ -2.15
RPC40YPR110C YMR295CQ03559 197 aa1.65□□□□□ -2.15
RPC40YPR110C GPI17Q04080 534 aa1.65□□□□□ -2.15
RPC40YPR110C RNH202Q05635 350 aa1.65□□□□□ -2.15
RPC40YPR110C SHH4Q06236 168 aa1.65□□□□□ -2.15
RPC40YPR110C YPR174CQ06616 221 aaPredicted RBP1.65□□□□□ -2.15
RPC40YPR110C YOR214CQ12282 236 aa1.65□□□□□ -2.15
RPC40YPR110C YIL046W-AQ3E7Z4 54 aa1.65□□□□□ -2.15
RPC40YPR110C MHF1Q3E835 90 aa1.65□□□□□ -2.15
RPC40YPR110C RIB3Q99258 208 aa1.65□□□□□ -2.15
RPC40YPR110C BRR2P32639 2163 aaKnown RBP1.65□□□□□ -2.15
RPC40YPR110C FMP27Q06179 2628 aa1.64□□□□□ -2.15
RPC40YPR110C PET54P10834 293 aa1.64□□□□□ -2.15
RPC40YPR110C STP22P25604 385 aa1.64□□□□□ -2.15
RPC40YPR110C YKL102CP34249 101 aa1.64□□□□□ -2.15
RPC40YPR110C POP7P38291 140 aa1.64□□□□□ -2.15
RPC40YPR110C NSG1P38837 291 aa1.64□□□□□ -2.15
RPC40YPR110C CUP9P41817 306 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms