RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C LSM1P47017 172 aaKnown RBP2.54□□□□□ -2
RPA43YOR340C YJR012CP47087 207 aa2.54□□□□□ -2
RPA43YOR340C ARP3P47117 449 aaKnown RBP2.54□□□□□ -2
RPA43YOR340C ARO8P53090 500 aaKnown RBP2.54□□□□□ -2
RPA43YOR340C CAX4P53223 239 aa2.54□□□□□ -2
RPA43YOR340C ACT1P60010 375 aaKnown RBP2.54□□□□□ -2
RPA43YOR340C VPS71Q03433 280 aa2.54□□□□□ -2
RPA43YOR340C SPG4Q04438 115 aa2.54□□□□□ -2
RPA43YOR340C PEX10Q05568 337 aa2.54□□□□□ -2
RPA43YOR340C LOA1Q06508 300 aa2.54□□□□□ -2
RPA43YOR340C IRC23Q08416 157 aa2.54□□□□□ -2
RPA43YOR340C SME1Q12330 94 aaPredicted RBP2.54□□□□□ -2
RPA43YOR340C MDN1Q12019 4910 aaKnown RBP2.53□□□□□ -2
RPA43YOR340C YMR316C-AI2HB70 103 aa2.53□□□□□ -2
RPA43YOR340C HTB1P02293 131 aaKnown RBP2.53□□□□□ -2
RPA43YOR340C QCR2P07257 368 aa2.53□□□□□ -2
RPA43YOR340C PUT1P09368 476 aa2.53□□□□□ -2
RPA43YOR340C ECM31P38122 312 aa2.53□□□□□ -2
RPA43YOR340C YBR242WP38331 238 aa2.53□□□□□ -2
RPA43YOR340C ASP1P38986 381 aaPredicted RBP2.53□□□□□ -2
RPA43YOR340C RFC2P40348 353 aa2.53□□□□□ -2
RPA43YOR340C RPA43P46669 326 aa2.53□□□□□ -2
RPA43YOR340C VPS55P47111 140 aa2.53□□□□□ -2
RPA43YOR340C VPS28Q02767 242 aa2.53□□□□□ -2
RPA43YOR340C PAM18Q07914 168 aa2.53□□□□□ -2
RPA43YOR340C HRD1Q08109 551 aa2.53□□□□□ -2
RPA43YOR340C YGR035W-AQ45U48 73 aa2.53□□□□□ -2
RPA43YOR340C GRX2P17695 143 aaKnown RBP2.52□□□□□ -2.01
RPA43YOR340C MRP17P28778 131 aa2.52□□□□□ -2.01
RPA43YOR340C ALK2P32789 676 aaPredicted RBP2.52□□□□□ -2.01
RPA43YOR340C LST8P41318 303 aa2.52□□□□□ -2.01
RPA43YOR340C FMP41P53889 259 aaKnown RBP2.52□□□□□ -2.01
RPA43YOR340C DYN2Q02647 92 aa2.52□□□□□ -2.01
RPA43YOR340C EST3Q03096 181 aa2.52□□□□□ -2.01
RPA43YOR340C COA2Q3E823 68 aa2.52□□□□□ -2.01
RPA43YOR340C ARG80P07249 177 aa2.51□□□□□ -2.01
RPA43YOR340C YHR212W-AP0CX91 67 aa2.51□□□□□ -2.01
RPA43YOR340C URA5P13298 226 aaKnown RBP2.51□□□□□ -2.01
RPA43YOR340C RNA15P25299 296 aaPredicted RBP2.51□□□□□ -2.01
RPA43YOR340C QRI5P32344 111 aa2.51□□□□□ -2.01
RPA43YOR340C MRPL38P35996 138 aaPredicted RBP2.51□□□□□ -2.01
RPA43YOR340C YPT31P38555 223 aaKnown RBP2.51□□□□□ -2.01
RPA43YOR340C YHR138CP38841 114 aaPredicted RBP2.51□□□□□ -2.01
RPA43YOR340C YAR068WP39564 161 aa2.51□□□□□ -2.01
RPA43YOR340C YIR035CP40579 254 aa2.51□□□□□ -2.01
RPA43YOR340C CGR1P53188 120 aa2.51□□□□□ -2.01
RPA43YOR340C YGR050CP53231 118 aa2.51□□□□□ -2.01
RPA43YOR340C MRPL50P53724 139 aa2.51□□□□□ -2.01
RPA43YOR340C GIM3P53900 129 aa2.51□□□□□ -2.01
RPA43YOR340C SMD1Q02260 146 aaPredicted RBP2.51□□□□□ -2.01
RPA43YOR340C HOR7Q05827 59 aa2.51□□□□□ -2.01
RPA43YOR340C RRT7Q07829 113 aa2.51□□□□□ -2.01
RPA43YOR340C YPR013CQ12145 317 aa2.51□□□□□ -2.01
RPA43YOR340C YCT1Q12235 531 aa2.51□□□□□ -2.01
RPA43YOR340C POC4Q12245 148 aaPredicted RBP2.51□□□□□ -2.01
RPA43YOR340C CKS1P20486 150 aaKnown RBP2.5□□□□□ -2.01
RPA43YOR340C SEC22P22214 214 aa2.5□□□□□ -2.01
RPA43YOR340C MIG1P27705 504 aa2.5□□□□□ -2.01
RPA43YOR340C ERV15P38312 142 aa2.5□□□□□ -2.01
RPA43YOR340C YER085CP40058 173 aa2.5□□□□□ -2.01
RPA43YOR340C COX15P40086 486 aa2.5□□□□□ -2.01
RPA43YOR340C YGR219WP53307 113 aa2.5□□□□□ -2.01
RPA43YOR340C SWT21P53873 357 aaPredicted RBP2.5□□□□□ -2.01
RPA43YOR340C YHP1Q04116 353 aa2.5□□□□□ -2.01
RPA43YOR340C YGL258W-AQ3E740 77 aa2.5□□□□□ -2.01
RPA43YOR340C SRY1P36007 326 aa2.49□□□□□ -2.01
RPA43YOR340C YBL081WP38180 368 aaKnown RBP2.49□□□□□ -2.01
RPA43YOR340C GLE2P40066 365 aa2.49□□□□□ -2.01
RPA43YOR340C YJR111CP47148 283 aaKnown RBP2.49□□□□□ -2.01
RPA43YOR340C TOS8P53147 276 aa2.49□□□□□ -2.01
RPA43YOR340C MRPS17Q03246 237 aaPredicted RBP2.49□□□□□ -2.01
RPA43YOR340C FRQ1Q06389 190 aa2.49□□□□□ -2.01
RPA43YOR340C CSM4Q08955 156 aa2.49□□□□□ -2.01
RPA43YOR340C YPL264CQ08980 353 aa2.49□□□□□ -2.01
RPA43YOR340C CUP2P15315 225 aa2.48□□□□□ -2.01
RPA43YOR340C CPT1P17898 393 aa2.48□□□□□ -2.01
RPA43YOR340C YEA6P39953 335 aa2.48□□□□□ -2.01
RPA43YOR340C SNU13P39990 126 aaKnown RBP2.48□□□□□ -2.01
RPA43YOR340C YGR269WP40326 108 aa2.48□□□□□ -2.01
RPA43YOR340C YGR025WP53216 100 aa2.48□□□□□ -2.01
RPA43YOR340C YMR082CQ04276 118 aa2.48□□□□□ -2.01
RPA43YOR340C YPS3Q12303 508 aa2.48□□□□□ -2.01
RPA43YOR340C YGL194C-AQ2V2P6 80 aa2.48□□□□□ -2.01
RPA43YOR340C TAR1Q8TGM6 124 aa2.48□□□□□ -2.01
RPA43YOR340C RPS25BP0C0T4 108 aaKnown RBP2.47□□□□□ -2.01
RPA43YOR340C FCY2P17064 533 aa2.47□□□□□ -2.01
RPA43YOR340C MIC12P38341 106 aa2.47□□□□□ -2.01
RPA43YOR340C SLM6P38343 150 aa2.47□□□□□ -2.01
RPA43YOR340C NSA2P40078 261 aaKnown RBP2.47□□□□□ -2.01
RPA43YOR340C YJL027CP47063 138 aaPredicted RBP2.47□□□□□ -2.01
RPA43YOR340C SSU72P53538 206 aaPredicted RBP2.47□□□□□ -2.01
RPA43YOR340C DXO1Q06349 442 aa2.47□□□□□ -2.01
RPA43YOR340C PRM3Q08931 133 aa2.47□□□□□ -2.01
RPA43YOR340C PRR2Q12310 699 aa2.47□□□□□ -2.01
RPA43YOR340C YLR146W-AQ2V2P1 62 aa2.47□□□□□ -2.01
RPA43YOR340C RPS25AQ3E792 108 aaPredicted RBP2.47□□□□□ -2.01
RPA43YOR340C YHR213WP0CI67 198 aa2.46□□□□□ -2.02
RPA43YOR340C AUA1P32450 94 aa2.46□□□□□ -2.02
RPA43YOR340C YBL071CP38185 102 aa2.46□□□□□ -2.02
RPA43YOR340C CSH1P38287 376 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms