RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W FMN1Q03778 218 aa0.29□□□□□ -2.36
VAM3YOR106W LAA1P39526 2014 aa0.28□□□□□ -2.36
VAM3YOR106W RPL33AP05744 107 aaKnown RBP0.28□□□□□ -2.36
VAM3YOR106W HTD2P38790 280 aaKnown RBP0.28□□□□□ -2.36
VAM3YOR106W RCF2P53721 224 aa0.28□□□□□ -2.36
VAM3YOR106W IRC19Q07843 230 aa0.28□□□□□ -2.36
VAM3YOR106W HSL1P34244 1518 aa0.28□□□□□ -2.37
VAM3YOR106W YLR157W-EP0CF00 54 aa0.27□□□□□ -2.37
VAM3YOR106W UBI4P0CG63 381 aaKnown RBP0.27□□□□□ -2.37
VAM3YOR106W FES1P38260 290 aa0.27□□□□□ -2.37
VAM3YOR106W MVB12P42939 101 aa0.27□□□□□ -2.37
VAM3YOR106W SPA2P23201 1466 aaKnown RBP0.27□□□□□ -2.37
VAM3YOR106W LSM3P57743 89 aaKnown RBP0.26□□□□□ -2.37
VAM3YOR106W GPI11Q06636 219 aa0.26□□□□□ -2.37
VAM3YOR106W MHF1Q3E835 90 aa0.26□□□□□ -2.37
VAM3YOR106W DLS1P40366 167 aa0.25□□□□□ -2.37
VAM3YOR106W VMA10P48836 114 aaKnown RBP0.25□□□□□ -2.37
VAM3YOR106W RFU1Q08003 200 aa0.25□□□□□ -2.37
VAM3YOR106W YLR046CQ12253 270 aa0.25□□□□□ -2.37
VAM3YOR106W RDI1Q12434 202 aa0.25□□□□□ -2.37
VAM3YOR106W YGL041W-AP0C5N3 154 aa0.24□□□□□ -2.37
VAM3YOR106W FIP1P45976 327 aa0.24□□□□□ -2.37
VAM3YOR106W YGL014C-AP0C5N1 53 aa0.23□□□□□ -2.37
VAM3YOR106W RPL30P14120 105 aaKnown RBP0.23□□□□□ -2.37
VAM3YOR106W PEX34P25584 144 aa0.23□□□□□ -2.37
VAM3YOR106W YER121WP40076 114 aa0.23□□□□□ -2.37
VAM3YOR106W ATG38Q05789 226 aaKnown RBP0.23□□□□□ -2.37
VAM3YOR106W YLR053CQ12026 108 aa0.23□□□□□ -2.37
VAM3YOR106W SCS22Q6Q595 175 aa0.23□□□□□ -2.37
VAM3YOR106W DDR48P18899 430 aaKnown RBP0.22□□□□□ -2.37
VAM3YOR106W YER181CP40097 107 aa0.22□□□□□ -2.37
VAM3YOR106W GPI2P46961 280 aa0.22□□□□□ -2.37
VAM3YOR106W EST3Q03096 181 aa0.22□□□□□ -2.37
VAM3YOR106W GIM5Q04493 163 aa0.22□□□□□ -2.37
VAM3YOR106W IRC21Q04772 201 aa0.22□□□□□ -2.37
VAM3YOR106W YPR153WQ06537 140 aa0.22□□□□□ -2.37
VAM3YOR106W YPD1Q07688 167 aa0.22□□□□□ -2.37
VAM3YOR106W NHP6AP11632 93 aaKnown RBP0.21□□□□□ -2.38
VAM3YOR106W PHO13P19881 312 aa0.21□□□□□ -2.38
VAM3YOR106W APQ12P40532 138 aa0.21□□□□□ -2.38
VAM3YOR106W YOR034C-AQ3E735 80 aa0.21□□□□□ -2.38
VAM3YOR106W VPS51P36116 164 aa0.2□□□□□ -2.38
VAM3YOR106W YJL009WP47078 108 aa0.2□□□□□ -2.38
VAM3YOR106W ATP19P81451 68 aa0.2□□□□□ -2.38
VAM3YOR106W YMR321CQ04898 105 aa0.2□□□□□ -2.38
VAM3YOR106W UBR1P19812 1950 aa0.19□□□□□ -2.38
VAM3YOR106W COX5BP00425 151 aa0.19□□□□□ -2.38
VAM3YOR106W MRPL24P36525 258 aaPredicted RBP0.19□□□□□ -2.38
VAM3YOR106W SLM6P38343 150 aa0.19□□□□□ -2.38
VAM3YOR106W YGL193CP53097 103 aa0.19□□□□□ -2.38
VAM3YOR106W YCL001W-AP87012 153 aa0.19□□□□□ -2.38
VAM3YOR106W YMR122CQ03879 124 aa0.19□□□□□ -2.38
VAM3YOR106W YPR202WQ08993 238 aa0.19□□□□□ -2.38
VAM3YOR106W KTI11Q3E840 82 aa0.19□□□□□ -2.38
VAM3YOR106W HUG1Q6Q5K6 68 aa0.19□□□□□ -2.38
VAM3YOR106W GSC2P40989 1895 aa0.18□□□□□ -2.38
VAM3YOR106W BLM10P43583 2143 aa0.17□□□□□ -2.38
VAM3YOR106W YJL218WP40892 196 aaKnown RBP0.17□□□□□ -2.38
VAM3YOR106W YNL019CP53975 284 aa0.17□□□□□ -2.38
VAM3YOR106W MAK3Q03503 176 aa0.17□□□□□ -2.38
VAM3YOR106W RRT7Q07829 113 aa0.17□□□□□ -2.38
VAM3YOR106W COA6Q3E846 104 aa0.17□□□□□ -2.38
VAM3YOR106W YDR476CQ03362 224 aa0.16□□□□□ -2.38
VAM3YOR106W NSL1Q12143 216 aa0.16□□□□□ -2.38
VAM3YOR106W EFG1Q3E705 233 aaKnown RBP0.16□□□□□ -2.38
VAM3YOR106W SNF2P22082 1703 aa0.16□□□□□ -2.38
VAM3YOR106W URA2P07259 2214 aaKnown RBP0.15□□□□□ -2.38
VAM3YOR106W IPI1P38803 334 aaPredicted RBP0.15□□□□□ -2.39
VAM3YOR106W EMC4P53073 190 aa0.15□□□□□ -2.39
VAM3YOR106W RPL40AP0CH08 128 aaKnown RBP0.14□□□□□ -2.39
VAM3YOR106W RPL40BP0CH09 128 aaKnown RBP0.14□□□□□ -2.39
VAM3YOR106W FYV5P25585 152 aa0.14□□□□□ -2.39
VAM3YOR106W UTP11P34247 250 aaPredicted RBP0.14□□□□□ -2.39
VAM3YOR106W SRL3P36167 246 aa0.14□□□□□ -2.39
VAM3YOR106W LST8P41318 303 aa0.14□□□□□ -2.39
VAM3YOR106W COA4Q05809 96 aa0.14□□□□□ -2.39
VAM3YOR106W CMC2Q3E7A4 109 aa0.14□□□□□ -2.39
VAM3YOR106W CHD1P32657 1468 aa0.14□□□□□ -2.39
VAM3YOR106W NMT1P14743 455 aa0.13□□□□□ -2.39
VAM3YOR106W YBR013CP38215 129 aa0.13□□□□□ -2.39
VAM3YOR106W AIM4P38305 123 aaPredicted RBP0.13□□□□□ -2.39
VAM3YOR106W FIT3Q08907 204 aa0.13□□□□□ -2.39
VAM3YOR106W HUT1Q12520 339 aa0.13□□□□□ -2.39
VAM3YOR106W PBI2P0CT04 75 aaKnown RBP0.12□□□□□ -2.39
VAM3YOR106W FUN14P18411 198 aa0.12□□□□□ -2.39
VAM3YOR106W RPS1BP23248 255 aaKnown RBP0.12□□□□□ -2.39
VAM3YOR106W MIC27P50945 234 aa0.12□□□□□ -2.39
VAM3YOR106W HSP12P22943 109 aaKnown RBP0.11□□□□□ -2.39
VAM3YOR106W PHB1P40961 287 aa0.11□□□□□ -2.39
VAM3YOR106W BNI1P41832 1953 aa0.1□□□□□ -2.39
VAM3YOR106W QCR2P07257 368 aa0.1□□□□□ -2.39
VAM3YOR106W YHR213WP0CI67 198 aa0.1□□□□□ -2.39
VAM3YOR106W YGR201CP42936 225 aa0.1□□□□□ -2.39
VAM3YOR106W TY4B-JP47024 1803 aa0.09□□□□□ -2.39
VAM3YOR106W BUB2P26448 306 aaPredicted RBP0.09□□□□□ -2.4
VAM3YOR106W AME1P38313 324 aa0.09□□□□□ -2.4
VAM3YOR106W YPL067CQ02754 198 aa0.09□□□□□ -2.4
VAM3YOR106W SOM1Q05676 74 aa0.09□□□□□ -2.4
VAM3YOR106W ANB1P19211 157 aa0.08□□□□□ -2.4
VAM3YOR106W DER1P38307 211 aa0.08□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 154.5 ms