RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YLR030WQ07967 263 aa2.08□□□□□ -2.08
DNL4YOR005C YDR524C-BQ3E6R4 66 aa2.08□□□□□ -2.08
DNL4YOR005C YAL063C-AQ3E791 96 aa2.08□□□□□ -2.08
DNL4YOR005C RPS25AQ3E792 108 aaPredicted RBP2.08□□□□□ -2.08
DNL4YOR005C YLR422WQ06409 1932 aa2.07□□□□□ -2.08
DNL4YOR005C MSW1P04803 379 aa2.07□□□□□ -2.08
DNL4YOR005C MRPL39P36533 70 aa2.07□□□□□ -2.08
DNL4YOR005C AME1P38313 324 aa2.07□□□□□ -2.08
DNL4YOR005C OM14P38325 134 aa2.07□□□□□ -2.08
DNL4YOR005C YLR460CP54007 376 aa2.07□□□□□ -2.08
DNL4YOR005C HHT1P61830 136 aa2.07□□□□□ -2.08
DNL4YOR005C YMR090WQ04304 227 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C MCH1Q07376 486 aa2.07□□□□□ -2.08
DNL4YOR005C RPS22AP0C0W1 130 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C URA5P13298 226 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C IMP1P28627 190 aa2.07□□□□□ -2.08
DNL4YOR005C UPS2P35200 230 aa2.07□□□□□ -2.08
DNL4YOR005C SHB17P36136 271 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C DOG1P38774 246 aa2.07□□□□□ -2.08
DNL4YOR005C YGL034CP53186 121 aa2.07□□□□□ -2.08
DNL4YOR005C YDR366CP87287 132 aa2.07□□□□□ -2.08
DNL4YOR005C DIG2Q03373 323 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C RUB1Q03919 77 aa2.07□□□□□ -2.08
DNL4YOR005C HRT1Q08273 121 aa2.07□□□□□ -2.08
DNL4YOR005C MCP1Q12106 302 aa2.07□□□□□ -2.08
DNL4YOR005C USB1Q12208 290 aaKnown RBP2.07□□□□□ -2.08
DNL4YOR005C QCR9P22289 66 aa2.06□□□□□ -2.08
DNL4YOR005C AHT1P29589 182 aa2.06□□□□□ -2.08
DNL4YOR005C PAU16P35994 123 aa2.06□□□□□ -2.08
DNL4YOR005C MIG3P39943 394 aa2.06□□□□□ -2.08
DNL4YOR005C COQ5P49017 307 aa2.06□□□□□ -2.08
DNL4YOR005C DAD3P69850 94 aa2.06□□□□□ -2.08
DNL4YOR005C YPL067CQ02754 198 aa2.06□□□□□ -2.08
DNL4YOR005C MRX11Q03079 207 aa2.06□□□□□ -2.08
DNL4YOR005C SHH3Q04487 196 aa2.06□□□□□ -2.08
DNL4YOR005C CNL1Q06333 122 aa2.06□□□□□ -2.08
DNL4YOR005C ATG10Q07879 167 aa2.06□□□□□ -2.08
DNL4YOR005C PRR2Q12310 699 aa2.06□□□□□ -2.08
DNL4YOR005C ATG40Q99325 256 aa2.06□□□□□ -2.08
DNL4YOR005C FLO9P39712 1322 aa2.06□□□□□ -2.08
DNL4YOR005C FMP49A0A023PZB3 126 aa2.06□□□□□ -2.08
DNL4YOR005C MRP49P32388 137 aa2.06□□□□□ -2.08
DNL4YOR005C RPL14AP36105 138 aaKnown RBP2.06□□□□□ -2.08
DNL4YOR005C RPL14BP38754 138 aaKnown RBP2.06□□□□□ -2.08
DNL4YOR005C GPI2P46961 280 aa2.06□□□□□ -2.08
DNL4YOR005C XPT1P47165 209 aa2.06□□□□□ -2.08
DNL4YOR005C TTI2P47168 421 aa2.06□□□□□ -2.08
DNL4YOR005C YNR064CP53750 290 aa2.06□□□□□ -2.08
DNL4YOR005C NCE101Q02820 53 aa2.06□□□□□ -2.08
DNL4YOR005C INP1Q03694 420 aa2.06□□□□□ -2.08
DNL4YOR005C YDR115WQ04598 105 aa2.06□□□□□ -2.08
DNL4YOR005C YMR317WQ04893 1140 aa2.06□□□□□ -2.08
DNL4YOR005C YPL264CQ08980 353 aa2.06□□□□□ -2.08
DNL4YOR005C RPS22BQ3E7Y3 130 aaKnown RBP2.06□□□□□ -2.08
DNL4YOR005C COA2Q3E823 68 aa2.06□□□□□ -2.08
DNL4YOR005C YLR365WQ7LIF2 110 aa2.06□□□□□ -2.08
DNL4YOR005C SUA7P29055 345 aaPredicted RBP2.05□□□□□ -2.08
DNL4YOR005C UTR5P32630 166 aa2.05□□□□□ -2.08
DNL4YOR005C PEX17P40155 199 aa2.05□□□□□ -2.08
DNL4YOR005C CYB5P40312 120 aa2.05□□□□□ -2.08
DNL4YOR005C YIL012WP40551 113 aa2.05□□□□□ -2.08
DNL4YOR005C RPL21AQ02753 160 aaKnown RBP2.05□□□□□ -2.08
DNL4YOR005C PET191Q02772 108 aa2.05□□□□□ -2.08
DNL4YOR005C RCE1Q03530 315 aa2.05□□□□□ -2.08
DNL4YOR005C MSA1Q08471 629 aa2.05□□□□□ -2.08
DNL4YOR005C NAT5Q08689 176 aa2.05□□□□□ -2.08
DNL4YOR005C POR1P04840 283 aaKnown RBP2.05□□□□□ -2.08
DNL4YOR005C CPT1P17898 393 aa2.05□□□□□ -2.08
DNL4YOR005C FPR1P20081 114 aaKnown RBP2.05□□□□□ -2.08
DNL4YOR005C ERG2P32352 222 aa2.05□□□□□ -2.08
DNL4YOR005C ECM33P38248 429 aaKnown RBP2.05□□□□□ -2.08
DNL4YOR005C FYV4P38783 130 aaPredicted RBP2.05□□□□□ -2.08
DNL4YOR005C KRE9P39005 276 aa2.05□□□□□ -2.08
DNL4YOR005C THG1P53215 237 aaKnown RBP2.05□□□□□ -2.08
DNL4YOR005C API2Q04413 109 aa2.05□□□□□ -2.08
DNL4YOR005C YML096WQ04489 525 aa2.05□□□□□ -2.08
DNL4YOR005C PRP11Q07350 266 aaPredicted RBP2.05□□□□□ -2.08
DNL4YOR005C YOR343CQ12484 108 aa2.05□□□□□ -2.08
DNL4YOR005C YHR139C-AO13536 103 aa2.04□□□□□ -2.08
DNL4YOR005C YPR170W-BP0C5R9 85 aa2.04□□□□□ -2.08
DNL4YOR005C SPO13P23624 291 aa2.04□□□□□ -2.08
DNL4YOR005C PEX4P29340 183 aa2.04□□□□□ -2.08
DNL4YOR005C GSP1P32835 219 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C GSP2P32836 220 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C FIG1P38224 298 aa2.04□□□□□ -2.08
DNL4YOR005C RPF1P38805 295 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C MRPL49P40858 161 aaPredicted RBP2.04□□□□□ -2.08
DNL4YOR005C IGD1P43598 195 aa2.04□□□□□ -2.08
DNL4YOR005C YGR017WP53210 297 aa2.04□□□□□ -2.08
DNL4YOR005C BOR1P53838 576 aa2.04□□□□□ -2.08
DNL4YOR005C YMR244WQ04018 355 aa2.04□□□□□ -2.08
DNL4YOR005C IRC19Q07843 230 aa2.04□□□□□ -2.08
DNL4YOR005C YOL024WQ08172 172 aa2.04□□□□□ -2.08
DNL4YOR005C HUT1Q12520 339 aa2.04□□□□□ -2.08
DNL4YOR005C SEC4P07560 215 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C DDI2P0CH63 225 aa2.04□□□□□ -2.08
DNL4YOR005C DDI3P0CH64 225 aa2.04□□□□□ -2.08
DNL4YOR005C ANB1P19211 157 aa2.04□□□□□ -2.08
DNL4YOR005C YGL010WP25338 174 aa2.04□□□□□ -2.08
DNL4YOR005C ECM14P38836 430 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 169.4 ms