RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C ERV15P38312 142 aa2.35□□□□□ -2.03
SSN8YNL025C TRS20P38334 175 aa2.35□□□□□ -2.03
SSN8YNL025C YFR045WP43617 309 aa2.35□□□□□ -2.03
SSN8YNL025C THG1P53215 237 aaKnown RBP2.35□□□□□ -2.03
SSN8YNL025C SAY1P53324 424 aa2.35□□□□□ -2.03
SSN8YNL025C YNR062CP53748 327 aa2.35□□□□□ -2.03
SSN8YNL025C HAL1Q01766 294 aa2.35□□□□□ -2.03
SSN8YNL025C YMR090WQ04304 227 aaKnown RBP2.35□□□□□ -2.03
SSN8YNL025C FIT1Q04433 528 aa2.35□□□□□ -2.03
SSN8YNL025C ATG10Q07879 167 aa2.35□□□□□ -2.03
SSN8YNL025C YAL067W-AQ8TGK6 75 aa2.35□□□□□ -2.03
SSN8YNL025C ARO1P08566 1588 aaKnown RBP2.35□□□□□ -2.03
SSN8YNL025C GEA2P39993 1459 aaKnown RBP2.34□□□□□ -2.03
SSN8YNL025C SNQ2P32568 1501 aaKnown RBP2.34□□□□□ -2.03
SSN8YNL025C HAP3P13434 144 aa2.34□□□□□ -2.03
SSN8YNL025C RRT1P38192 103 aa2.34□□□□□ -2.03
SSN8YNL025C YHR130CP38834 111 aa2.34□□□□□ -2.03
SSN8YNL025C CTR2P38865 189 aa2.34□□□□□ -2.03
SSN8YNL025C SNU13P39990 126 aaKnown RBP2.34□□□□□ -2.03
SSN8YNL025C CCS1P40202 249 aaKnown RBP2.34□□□□□ -2.03
SSN8YNL025C FLX1P40464 311 aa2.34□□□□□ -2.03
SSN8YNL025C ECO1P43605 281 aa2.34□□□□□ -2.03
SSN8YNL025C SMD1Q02260 146 aaPredicted RBP2.34□□□□□ -2.03
SSN8YNL025C SWC7Q06707 132 aa2.34□□□□□ -2.03
SSN8YNL025C FYV12Q08559 129 aa2.34□□□□□ -2.03
SSN8YNL025C RPL13AQ12690 199 aaPredicted RBP2.34□□□□□ -2.03
SSN8YNL025C YBR298C-AQ8TGK4 73 aa2.34□□□□□ -2.03
SSN8YNL025C MED11Q99278 115 aa2.34□□□□□ -2.03
SSN8YNL025C KOG1P38873 1557 aa2.34□□□□□ -2.03
SSN8YNL025C MSW1P04803 379 aa2.33□□□□□ -2.04
SSN8YNL025C RPB9P27999 122 aa2.33□□□□□ -2.04
SSN8YNL025C SCM4P32564 187 aa2.33□□□□□ -2.04
SSN8YNL025C MRPL11P36521 249 aaPredicted RBP2.33□□□□□ -2.04
SSN8YNL025C ECM31P38122 312 aa2.33□□□□□ -2.04
SSN8YNL025C YAR029WP39549 74 aa2.33□□□□□ -2.04
SSN8YNL025C YIL059CP40520 121 aa2.33□□□□□ -2.04
SSN8YNL025C TIR3P40552 269 aa2.33□□□□□ -2.04
SSN8YNL025C RSM10Q03201 203 aa2.33□□□□□ -2.04
SSN8YNL025C SCP1Q08873 200 aa2.33□□□□□ -2.04
SSN8YNL025C ATO3Q12359 275 aa2.33□□□□□ -2.04
SSN8YNL025C SCS22Q6Q595 175 aa2.33□□□□□ -2.04
SSN8YNL025C CAT8P39113 1433 aa2.33□□□□□ -2.04
SSN8YNL025C GDB1Q06625 1536 aa2.32□□□□□ -2.04
SSN8YNL025C COX4P04037 155 aa2.32□□□□□ -2.04
SSN8YNL025C RAD10P06838 210 aa2.32□□□□□ -2.04
SSN8YNL025C COX10P21592 462 aa2.32□□□□□ -2.04
SSN8YNL025C YGL010WP25338 174 aa2.32□□□□□ -2.04
SSN8YNL025C YNL217WP40152 326 aa2.32□□□□□ -2.04
SSN8YNL025C RPL13BP40212 199 aaKnown RBP2.32□□□□□ -2.04
SSN8YNL025C FCF1Q05498 189 aaPredicted RBP2.32□□□□□ -2.04
SSN8YNL025C RAF1Q06891 181 aa2.32□□□□□ -2.04
SSN8YNL025C COA6Q3E846 104 aa2.32□□□□□ -2.04
SSN8YNL025C TY3B-IQ7LHG5 1498 aaKnown RBP2.32□□□□□ -2.04
SSN8YNL025C COX5BP00425 151 aa2.31□□□□□ -2.04
SSN8YNL025C YET1P35723 206 aa2.31□□□□□ -2.04
SSN8YNL025C YCL001W-AP87012 153 aa2.31□□□□□ -2.04
SSN8YNL025C YMR252CQ04814 134 aa2.31□□□□□ -2.04
SSN8YNL025C YPR063CQ12160 140 aa2.31□□□□□ -2.04
SSN8YNL025C YGL194C-AQ2V2P6 80 aa2.31□□□□□ -2.04
SSN8YNL025C RSF2P46974 1380 aa2.31□□□□□ -2.04
SSN8YNL025C PDR15Q04182 1529 aaKnown RBP2.31□□□□□ -2.04
SSN8YNL025C TY3B-GQ99315 1547 aa2.31□□□□□ -2.04
SSN8YNL025C MRPL44P19956 98 aa2.3□□□□□ -2.04
SSN8YNL025C YKR032WP36127 104 aa2.3□□□□□ -2.04
SSN8YNL025C PAM17P36147 197 aa2.3□□□□□ -2.04
SSN8YNL025C SWD3P38123 315 aa2.3□□□□□ -2.04
SSN8YNL025C IPT1P38954 527 aa2.3□□□□□ -2.04
SSN8YNL025C TVP23P38962 199 aa2.3□□□□□ -2.04
SSN8YNL025C YAL064WP39711 94 aa2.3□□□□□ -2.04
SSN8YNL025C GTT1P40582 234 aa2.3□□□□□ -2.04
SSN8YNL025C YML079WQ03629 201 aa2.3□□□□□ -2.04
SSN8YNL025C YPR174CQ06616 221 aaPredicted RBP2.3□□□□□ -2.04
SSN8YNL025C CSI2Q08054 341 aa2.3□□□□□ -2.04
SSN8YNL025C YOR015WQ12169 119 aa2.3□□□□□ -2.04
SSN8YNL025C ATG2P53855 1592 aa2.3□□□□□ -2.04
SSN8YNL025C RKR1Q04781 1562 aa2.3□□□□□ -2.04
SSN8YNL025C ULS1Q08562 1619 aa2.3□□□□□ -2.04
SSN8YNL025C DNF1P32660 1571 aa2.29□□□□□ -2.04
SSN8YNL025C RPO31P04051 1460 aa2.29□□□□□ -2.04
SSN8YNL025C MET5P47169 1442 aa2.29□□□□□ -2.04
SSN8YNL025C FLO11P08640 1367 aa2.29□□□□□ -2.04
SSN8YNL025C AUS1Q08409 1394 aa2.29□□□□□ -2.04
SSN8YNL025C MRPL27P36526 146 aaPredicted RBP2.29□□□□□ -2.04
SSN8YNL025C YHL042WP38729 150 aa2.29□□□□□ -2.04
SSN8YNL025C TDA2P40045 126 aa2.29□□□□□ -2.04
SSN8YNL025C ERG25P53045 309 aa2.29□□□□□ -2.04
SSN8YNL025C GPI19Q04082 140 aa2.29□□□□□ -2.04
SSN8YNL025C YHP1Q04116 353 aa2.29□□□□□ -2.04
SSN8YNL025C RIM9Q04734 239 aa2.29□□□□□ -2.04
SSN8YNL025C TMC1Q08422 150 aaPredicted RBP2.29□□□□□ -2.04
SSN8YNL025C YOR381W-AQ3E804 55 aa2.29□□□□□ -2.04
SSN8YNL025C YOS1Q3E834 85 aa2.29□□□□□ -2.04
SSN8YNL025C DNF2Q12675 1612 aa2.28□□□□□ -2.04
SSN8YNL025C HAP1P0CE41 1502 aa2.28□□□□□ -2.04
SSN8YNL025C IQG1Q12280 1495 aa2.28□□□□□ -2.04
SSN8YNL025C LTE1P07866 1435 aa2.28□□□□□ -2.04
SSN8YNL025C RPS19AP07280 144 aaKnown RBP2.28□□□□□ -2.04
SSN8YNL025C RPS19BP07281 144 aaPredicted RBP2.28□□□□□ -2.04
SSN8YNL025C YHR032W-AP0C5N6 59 aa2.28□□□□□ -2.04
SSN8YNL025C FZF1P32805 299 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 96.4 ms