RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C DER1P38307 211 aa3.76□□□□□ -1.81
BUD28YLR062C YIL077CP40508 320 aa3.76□□□□□ -1.81
BUD28YLR062C IZH1Q03419 316 aa3.76□□□□□ -1.81
BUD28YLR062C AVO2Q04749 426 aa3.76□□□□□ -1.81
BUD28YLR062C FCF2Q12035 217 aaPredicted RBP3.76□□□□□ -1.81
BUD28YLR062C MAG1P22134 296 aaKnown RBP3.75□□□□□ -1.81
BUD28YLR062C SPO13P23624 291 aa3.75□□□□□ -1.81
BUD28YLR062C ASP1P38986 381 aaPredicted RBP3.75□□□□□ -1.81
BUD28YLR062C YER135CP40082 130 aa3.75□□□□□ -1.81
BUD28YLR062C YNR066CP53752 436 aa3.75□□□□□ -1.81
BUD28YLR062C MRPS8Q03799 155 aa3.75□□□□□ -1.81
BUD28YLR062C ATG33Q06485 197 aa3.75□□□□□ -1.81
BUD28YLR062C YPL162CQ12042 273 aa3.75□□□□□ -1.81
BUD28YLR062C UBI4P0CG63 381 aaKnown RBP3.74□□□□□ -1.81
BUD28YLR062C ZRC1P20107 442 aa3.74□□□□□ -1.81
BUD28YLR062C PHD1P36093 366 aa3.74□□□□□ -1.81
BUD28YLR062C GCV3P39726 170 aaPredicted RBP3.74□□□□□ -1.81
BUD28YLR062C MIG3P39943 394 aa3.74□□□□□ -1.81
BUD28YLR062C YFR035CP43608 114 aa3.74□□□□□ -1.81
BUD28YLR062C RIB4P50861 169 aaPredicted RBP3.74□□□□□ -1.81
BUD28YLR062C MRPL50P53724 139 aa3.74□□□□□ -1.81
BUD28YLR062C MRPS17Q03246 237 aaPredicted RBP3.74□□□□□ -1.81
BUD28YLR062C STP4Q07351 490 aa3.74□□□□□ -1.81
BUD28YLR062C YPR063CQ12160 140 aa3.74□□□□□ -1.81
BUD28YLR062C MBB1P39534 108 aa3.73□□□□□ -1.81
BUD28YLR062C PRE5P40302 234 aaKnown RBP3.73□□□□□ -1.81
BUD28YLR062C SRB7P47822 140 aa3.73□□□□□ -1.81
BUD28YLR062C DSK2P48510 373 aa3.73□□□□□ -1.81
BUD28YLR062C ATC1Q04005 294 aa3.73□□□□□ -1.81
BUD28YLR062C LOA1Q06508 300 aa3.73□□□□□ -1.81
BUD28YLR062C FIT2Q08906 153 aa3.73□□□□□ -1.81
BUD28YLR062C YPR145C-AQ2V2P0 78 aa3.73□□□□□ -1.81
BUD28YLR062C RPS2P25443 254 aaKnown RBP3.72□□□□□ -1.81
BUD28YLR062C YBR292CP38357 123 aa3.72□□□□□ -1.81
BUD28YLR062C VMA22P38784 181 aa3.72□□□□□ -1.81
BUD28YLR062C MCM22P47167 239 aa3.72□□□□□ -1.81
BUD28YLR062C MRX11Q03079 207 aa3.72□□□□□ -1.81
BUD28YLR062C CCW12Q12127 133 aa3.72□□□□□ -1.81
BUD28YLR062C YOR015WQ12169 119 aa3.72□□□□□ -1.81
BUD28YLR062C RPS11AP0CX47 156 aaKnown RBP3.71□□□□□ -1.82
BUD28YLR062C RPS11BP0CX48 156 aaKnown RBP3.71□□□□□ -1.82
BUD28YLR062C RPB3P16370 318 aaKnown RBP3.71□□□□□ -1.82
BUD28YLR062C HSP12P22943 109 aaKnown RBP3.71□□□□□ -1.82
BUD28YLR062C ACP1P32463 125 aa3.71□□□□□ -1.82
BUD28YLR062C TRS20P38334 175 aa3.71□□□□□ -1.82
BUD28YLR062C YHR022CP38763 256 aa3.71□□□□□ -1.82
BUD28YLR062C JAC1P53193 184 aa3.71□□□□□ -1.82
BUD28YLR062C CAF40P53829 373 aa3.71□□□□□ -1.82
BUD28YLR062C ADD37Q03233 198 aa3.71□□□□□ -1.82
BUD28YLR062C ATX2Q12067 313 aa3.71□□□□□ -1.82
BUD28YLR062C ERV2Q12284 196 aa3.71□□□□□ -1.82
BUD28YLR062C MRS1P07266 363 aa3.7□□□□□ -1.82
BUD28YLR062C RPL2AP0CX45 254 aaKnown RBP3.7□□□□□ -1.82
BUD28YLR062C RPL2BP0CX46 254 aaKnown RBP3.7□□□□□ -1.82
BUD28YLR062C MRP2P10663 115 aaPredicted RBP3.7□□□□□ -1.82
BUD28YLR062C SPI1P40092 148 aa3.7□□□□□ -1.82
BUD28YLR062C SNX4P47057 423 aa3.7□□□□□ -1.82
BUD28YLR062C VAM10Q08474 114 aa3.7□□□□□ -1.82
BUD28YLR062C YCR001WP25347 104 aa3.69□□□□□ -1.82
BUD28YLR062C RPS0AP32905 252 aaKnown RBP3.69□□□□□ -1.82
BUD28YLR062C EMC5P40540 141 aa3.69□□□□□ -1.82
BUD28YLR062C SMD3P43321 101 aaKnown RBP3.69□□□□□ -1.82
BUD28YLR062C LOC1P43586 204 aaPredicted RBP3.69□□□□□ -1.82
BUD28YLR062C YJR096WP47137 282 aa3.69□□□□□ -1.82
BUD28YLR062C TOM7P53507 60 aa3.69□□□□□ -1.82
BUD28YLR062C YCL001W-AP87012 153 aa3.69□□□□□ -1.82
BUD28YLR062C HAL1Q01766 294 aa3.69□□□□□ -1.82
BUD28YLR062C SGF11Q03067 99 aa3.69□□□□□ -1.82
BUD28YLR062C SDO1Q07953 250 aaKnown RBP3.69□□□□□ -1.82
BUD28YLR062C COX19Q3E731 98 aa3.69□□□□□ -1.82
BUD28YLR062C HTB2P02294 131 aa3.68□□□□□ -1.82
BUD28YLR062C MRPL20P22354 195 aaPredicted RBP3.68□□□□□ -1.82
BUD28YLR062C RPL14AP36105 138 aaKnown RBP3.68□□□□□ -1.82
BUD28YLR062C RPL14BP38754 138 aaKnown RBP3.68□□□□□ -1.82
BUD28YLR062C YHR173CP38864 112 aa3.68□□□□□ -1.82
BUD28YLR062C SPC25P40014 221 aa3.68□□□□□ -1.82
BUD28YLR062C HUA1P40325 198 aa3.68□□□□□ -1.82
BUD28YLR062C VHS2P40463 436 aa3.68□□□□□ -1.82
BUD28YLR062C FMP41P53889 259 aaKnown RBP3.68□□□□□ -1.82
BUD28YLR062C RAV2Q03956 351 aa3.68□□□□□ -1.82
BUD28YLR062C YOL085CQ99345 113 aa3.68□□□□□ -1.82
BUD28YLR062C RNA15P25299 296 aaPredicted RBP3.67□□□□□ -1.82
BUD28YLR062C ECM25P32525 599 aa3.67□□□□□ -1.82
BUD28YLR062C YMR141CP40211 102 aa3.67□□□□□ -1.82
BUD28YLR062C PAU4P53427 120 aa3.67□□□□□ -1.82
BUD28YLR062C TMA23Q03525 211 aa3.67□□□□□ -1.82
BUD28YLR062C PLP1Q04004 230 aa3.67□□□□□ -1.82
BUD28YLR062C VAR1P02381 398 aa3.66□□□□□ -1.82
BUD28YLR062C CPT1P17898 393 aa3.66□□□□□ -1.82
BUD28YLR062C VMA16P23968 213 aa3.66□□□□□ -1.82
BUD28YLR062C SME1Q12330 94 aaPredicted RBP3.66□□□□□ -1.82
BUD28YLR062C TMA17Q12513 150 aa3.66□□□□□ -1.82
BUD28YLR062C RPL31BP0C2H9 113 aaKnown RBP3.65□□□□□ -1.83
BUD28YLR062C PAU1P0CE88 120 aa3.65□□□□□ -1.83
BUD28YLR062C PAU14P0CE89 120 aa3.65□□□□□ -1.83
BUD28YLR062C PAU6P0CE90 120 aa3.65□□□□□ -1.83
BUD28YLR062C PAU18P0CE91 120 aa3.65□□□□□ -1.83
BUD28YLR062C PAU8P0CE92 120 aa3.65□□□□□ -1.83
BUD28YLR062C PAU11P0CE93 120 aa3.65□□□□□ -1.83
BUD28YLR062C HMX1P32339 317 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms