RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W SRP21P32342 167 aa1.82□□□□□ -2.12
SDC25YLL016W PTC1P35182 281 aa1.82□□□□□ -2.12
SDC25YLL016W YER134CP40081 178 aa1.82□□□□□ -2.12
SDC25YLL016W YFL019CP43576 117 aa1.82□□□□□ -2.12
SDC25YLL016W ERJ5P43613 295 aaPredicted RBP1.82□□□□□ -2.12
SDC25YLL016W FIP1P45976 327 aa1.82□□□□□ -2.12
SDC25YLL016W AIF1P52923 378 aa1.82□□□□□ -2.12
SDC25YLL016W YGR219WP53307 113 aa1.82□□□□□ -2.12
SDC25YLL016W YMR230W-AQ3E7B5 62 aa1.82□□□□□ -2.12
SDC25YLL016W PCL1P24867 279 aa1.82□□□□□ -2.12
SDC25YLL016W YKR032WP36127 104 aa1.82□□□□□ -2.12
SDC25YLL016W YPI1P43587 155 aa1.82□□□□□ -2.12
SDC25YLL016W YGR026WP53217 278 aa1.82□□□□□ -2.12
SDC25YLL016W VPS28Q02767 242 aa1.82□□□□□ -2.12
SDC25YLL016W YLR412C-AQ3E742 68 aa1.82□□□□□ -2.12
SDC25YLL016W YOL085CQ99345 113 aa1.82□□□□□ -2.12
SDC25YLL016W SHE2P36068 246 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SDC25YLL016W GPI2P46961 280 aa1.82□□□□□ -2.12
SDC25YLL016W VPS71Q03433 280 aa1.82□□□□□ -2.12
SDC25YLL016W YDR391CQ04170 232 aa1.82□□□□□ -2.12
SDC25YLL016W OCA6Q12454 224 aa1.82□□□□□ -2.12
SDC25YLL016W ADH1P00330 348 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W TFC1P32367 649 aa1.81□□□□□ -2.12
SDC25YLL016W AIM18P38884 321 aa1.81□□□□□ -2.12
SDC25YLL016W AYR1P40471 297 aa1.81□□□□□ -2.12
SDC25YLL016W YFL012WP43580 148 aa1.81□□□□□ -2.12
SDC25YLL016W YGR039WP53225 103 aa1.81□□□□□ -2.12
SDC25YLL016W HAL1Q01766 294 aa1.81□□□□□ -2.12
SDC25YLL016W CGI121Q03705 181 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W TSA2Q04120 196 aa1.81□□□□□ -2.12
SDC25YLL016W NEJ1Q06148 342 aa1.81□□□□□ -2.12
SDC25YLL016W SPC3Q12133 184 aa1.81□□□□□ -2.12
SDC25YLL016W YOR214CQ12282 236 aa1.81□□□□□ -2.12
SDC25YLL016W BOL1Q3E793 110 aa1.81□□□□□ -2.12
SDC25YLL016W SAS5Q99314 248 aa1.81□□□□□ -2.12
SDC25YLL016W YAR023CD6VPM8 179 aa1.81□□□□□ -2.12
SDC25YLL016W GSP1P32835 219 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W GSP2P32836 220 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W APS3P47064 194 aa1.81□□□□□ -2.12
SDC25YLL016W ARL3Q02804 198 aa1.81□□□□□ -2.12
SDC25YLL016W DIG2Q03373 323 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W CNL1Q06333 122 aa1.81□□□□□ -2.12
SDC25YLL016W CDC39P25655 2108 aaKnown RBP1.81□□□□□ -2.12
SDC25YLL016W RPC19P28000 142 aaKnown RBP1.8□□□□□ -2.12
SDC25YLL016W MRPL17P36528 281 aa1.8□□□□□ -2.12
SDC25YLL016W VTC1P40046 129 aaRIP-Chip data1.8□□□□□ -2.12not detected
SDC25YLL016W YMR295CQ03559 197 aa1.8□□□□□ -2.12
SDC25YLL016W SCW10Q04951 389 aa1.8□□□□□ -2.12
SDC25YLL016W YBR220CP38318 560 aa1.8□□□□□ -2.12
SDC25YLL016W VMA7P39111 118 aa1.8□□□□□ -2.12
SDC25YLL016W HPM1P40481 377 aa1.8□□□□□ -2.12
SDC25YLL016W BLM10P43583 2143 aa1.8□□□□□ -2.12
SDC25YLL016W SLM2P53955 656 aa1.8□□□□□ -2.12
SDC25YLL016W YOR289WQ12012 251 aaPredicted RBP1.8□□□□□ -2.12
SDC25YLL016W YNL277W-AQ3E7Z0 62 aa1.8□□□□□ -2.12
SDC25YLL016W MSW1P04803 379 aa1.8□□□□□ -2.12
SDC25YLL016W SUI1P32911 108 aaKnown RBP1.8□□□□□ -2.12
SDC25YLL016W GVP36P40531 326 aaKnown RBP1.8□□□□□ -2.12
SDC25YLL016W MRPS8Q03799 155 aa1.8□□□□□ -2.12
SDC25YLL016W FCF1Q05498 189 aaPredicted RBP1.8□□□□□ -2.12
SDC25YLL016W FYV12Q08559 129 aa1.8□□□□□ -2.12
SDC25YLL016W RAD6P06104 172 aa1.79□□□□□ -2.12
SDC25YLL016W KIN28P06242 306 aa1.79□□□□□ -2.12
SDC25YLL016W SPT14P32363 452 aa1.79□□□□□ -2.12
SDC25YLL016W YEL045CP32616 141 aa1.79□□□□□ -2.12
SDC25YLL016W UTP11P34247 250 aaPredicted RBP1.79□□□□□ -2.12
SDC25YLL016W HTD2P38790 280 aaKnown RBP1.79□□□□□ -2.12
SDC25YLL016W YER137CP40083 148 aaKnown RBP1.79□□□□□ -2.12
SDC25YLL016W YKR005CQ02203 525 aa1.79□□□□□ -2.12
SDC25YLL016W GAL83Q04739 417 aa1.79□□□□□ -2.12
SDC25YLL016W NAT3Q06504 195 aa1.79□□□□□ -2.12
SDC25YLL016W YPR063CQ12160 140 aa1.79□□□□□ -2.12
SDC25YLL016W ODC2Q99297 307 aa1.79□□□□□ -2.12
SDC25YLL016W RPS1BP23248 255 aaKnown RBP1.79□□□□□ -2.12
SDC25YLL016W TMC1Q08422 150 aaPredicted RBP1.79□□□□□ -2.12
SDC25YLL016W FMP49A0A023PZB3 126 aa1.78□□□□□ -2.12
SDC25YLL016W YER135CP40082 130 aa1.78□□□□□ -2.12
SDC25YLL016W YER181CP40097 107 aa1.78□□□□□ -2.12
SDC25YLL016W RIO2P40160 425 aaKnown RBP1.78□□□□□ -2.12
SDC25YLL016W YJL218WP40892 196 aaKnown RBP1.78□□□□□ -2.12
SDC25YLL016W APS2Q00381 147 aa1.78□□□□□ -2.12
SDC25YLL016W Q0297Q9ZZV8 51 aa1.78□□□□□ -2.12
SDC25YLL016W FLO9P39712 1322 aa1.78□□□□□ -2.12
SDC25YLL016W POR1P04840 283 aaKnown RBP1.78□□□□□ -2.12
SDC25YLL016W PHO85P17157 305 aa1.78□□□□□ -2.12
SDC25YLL016W MRP49P32388 137 aa1.78□□□□□ -2.12
SDC25YLL016W UMP1P38293 148 aa1.78□□□□□ -2.12
SDC25YLL016W CTR2P38865 189 aa1.78□□□□□ -2.12
SDC25YLL016W PGD1P40356 397 aa1.78□□□□□ -2.12
SDC25YLL016W YFR045WP43617 309 aa1.78□□□□□ -2.12
SDC25YLL016W HSP26P15992 214 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
SDC25YLL016W PHO13P19881 312 aa1.77□□□□□ -2.13
SDC25YLL016W SNC2P33328 115 aa1.77□□□□□ -2.13
SDC25YLL016W FYV4P38783 130 aaPredicted RBP1.77□□□□□ -2.13
SDC25YLL016W YHR140WP38842 239 aa1.77□□□□□ -2.13
SDC25YLL016W EST3Q03096 181 aa1.77□□□□□ -2.13
SDC25YLL016W YDR114CQ04597 100 aa1.77□□□□□ -2.13
SDC25YLL016W HIS3P06633 220 aa1.77□□□□□ -2.13
SDC25YLL016W RPS27AP35997 82 aaKnown RBP1.77□□□□□ -2.13
SDC25YLL016W RPS27BP38711 82 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms