RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W PAN3P36102 679 aaPredicted RBP2.94□□□□□ -1.94
NUP85YJR042W RPL14AP36105 138 aaKnown RBP2.94□□□□□ -1.94
NUP85YJR042W ECM34P38728 170 aa2.94□□□□□ -1.94
NUP85YJR042W RPL14BP38754 138 aaKnown RBP2.94□□□□□ -1.94
NUP85YJR042W MED6P38782 295 aa2.94□□□□□ -1.94
NUP85YJR042W NSG1P38837 291 aa2.94□□□□□ -1.94
NUP85YJR042W YFL019CP43576 117 aa2.94□□□□□ -1.94
NUP85YJR042W SWT21P53873 357 aaPredicted RBP2.94□□□□□ -1.94
NUP85YJR042W APJ1P53940 528 aa2.94□□□□□ -1.94
NUP85YJR042W RSM10Q03201 203 aa2.94□□□□□ -1.94
NUP85YJR042W CGI121Q03705 181 aaKnown RBP2.94□□□□□ -1.94
NUP85YJR042W ANT1Q06497 328 aa2.94□□□□□ -1.94
NUP85YJR042W IZH2Q12442 317 aa2.94□□□□□ -1.94
NUP85YJR042W YIR021W-AQ3E739 70 aa2.94□□□□□ -1.94
NUP85YJR042W YCL021W-AQ96VH3 125 aa2.94□□□□□ -1.94
NUP85YJR042W DDI2P0CH63 225 aa2.93□□□□□ -1.94
NUP85YJR042W DDI3P0CH64 225 aa2.93□□□□□ -1.94
NUP85YJR042W SPT15P13393 240 aaKnown RBP2.93□□□□□ -1.94
NUP85YJR042W TOM40P23644 387 aaKnown RBP2.93□□□□□ -1.94
NUP85YJR042W EMP24P32803 203 aaKnown RBP2.93□□□□□ -1.94
NUP85YJR042W TIM12P32830 109 aa2.93□□□□□ -1.94
NUP85YJR042W YHR140WP38842 239 aa2.93□□□□□ -1.94
NUP85YJR042W YER181CP40097 107 aa2.93□□□□□ -1.94
NUP85YJR042W TDA4P47153 279 aa2.93□□□□□ -1.94
NUP85YJR042W GEP5Q12393 293 aa2.93□□□□□ -1.94
NUP85YJR042W FMP49A0A023PZB3 126 aa2.93□□□□□ -1.94
NUP85YJR042W CBP6P07253 162 aaPredicted RBP2.93□□□□□ -1.94
NUP85YJR042W SRB6P32570 121 aa2.93□□□□□ -1.94
NUP85YJR042W MRPL24P36525 258 aaPredicted RBP2.93□□□□□ -1.94
NUP85YJR042W ECM31P38122 312 aa2.93□□□□□ -1.94
NUP85YJR042W SYS1P41544 203 aa2.93□□□□□ -1.94
NUP85YJR042W SFT1P43682 97 aa2.93□□□□□ -1.94
NUP85YJR042W UFD1P53044 361 aa2.93□□□□□ -1.94
NUP85YJR042W YGL262WP53054 175 aa2.93□□□□□ -1.94
NUP85YJR042W HHO1P53551 258 aa2.93□□□□□ -1.94
NUP85YJR042W RPL21BQ12672 160 aaKnown RBP2.93□□□□□ -1.94
NUP85YJR042W YOL085CQ99345 113 aa2.93□□□□□ -1.94
NUP85YJR042W VTC1P40046 129 aaRIP-Chip data2.92□□□□□ -1.94not detected
NUP85YJR042W YNL208WP40159 199 aaKnown RBP2.92□□□□□ -1.94
NUP85YJR042W YNR062CP53748 327 aa2.92□□□□□ -1.94
NUP85YJR042W DFM1Q12743 341 aaKnown RBP2.92□□□□□ -1.94
NUP85YJR042W PHO85P17157 305 aa2.92□□□□□ -1.94
NUP85YJR042W FMP46P36141 133 aaKnown RBP2.92□□□□□ -1.94
NUP85YJR042W MRPL27P36526 146 aaPredicted RBP2.92□□□□□ -1.94
NUP85YJR042W CTR2P38865 189 aa2.92□□□□□ -1.94
NUP85YJR042W GCV3P39726 170 aaPredicted RBP2.92□□□□□ -1.94
NUP85YJR042W RSM27P53305 110 aa2.92□□□□□ -1.94
NUP85YJR042W DAD3P69850 94 aa2.92□□□□□ -1.94
NUP85YJR042W CWC27Q02770 301 aa2.92□□□□□ -1.94
NUP85YJR042W API2Q04413 109 aa2.92□□□□□ -1.94
NUP85YJR042W NMA1Q06178 401 aaKnown RBP2.92□□□□□ -1.94
NUP85YJR042W HTL1Q9URQ5 78 aa2.92□□□□□ -1.94
NUP85YJR042W SGA1P08019 549 aa2.91□□□□□ -1.94
NUP85YJR042W YPR170W-BP0C5R9 85 aa2.91□□□□□ -1.94
NUP85YJR042W YER039C-AP0CD97 72 aa2.91□□□□□ -1.94
NUP85YJR042W YLR156WP0CE96 114 aa2.91□□□□□ -1.94
NUP85YJR042W YLR159WP0CE97 114 aa2.91□□□□□ -1.94
NUP85YJR042W YLR161WP0CE98 114 aa2.91□□□□□ -1.94
NUP85YJR042W YCR043CP25361 127 aa2.91□□□□□ -1.94
NUP85YJR042W ASP1P38986 381 aaPredicted RBP2.91□□□□□ -1.94
NUP85YJR042W APS2Q00381 147 aa2.91□□□□□ -1.94
NUP85YJR042W TMA23Q03525 211 aa2.91□□□□□ -1.94
NUP85YJR042W FSF1Q12029 327 aaKnown RBP2.91□□□□□ -1.94
NUP85YJR042W YLR118CQ12354 227 aa2.91□□□□□ -1.94
NUP85YJR042W ATP5P09457 212 aa2.91□□□□□ -1.94
NUP85YJR042W YPT53P36019 220 aa2.91□□□□□ -1.94
NUP85YJR042W SWD3P38123 315 aa2.91□□□□□ -1.94
NUP85YJR042W PRE5P40302 234 aaKnown RBP2.91□□□□□ -1.94
NUP85YJR042W XPT1P47165 209 aa2.91□□□□□ -1.94
NUP85YJR042W YDR366CP87287 132 aa2.91□□□□□ -1.94
NUP85YJR042W FYV12Q08559 129 aa2.91□□□□□ -1.94
NUP85YJR042W VMA9Q3E7B6 73 aa2.91□□□□□ -1.94
NUP85YJR042W CYR1P08678 2026 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W SHB17P36136 271 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W SNN1P48232 102 aa2.9□□□□□ -1.95
NUP85YJR042W YGR039WP53225 103 aa2.9□□□□□ -1.95
NUP85YJR042W SCW4P53334 386 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W ALG9P53868 555 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W SAE3P89114 91 aa2.9□□□□□ -1.95
NUP85YJR042W RPL21AQ02753 160 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W YLR042CQ07990 161 aa2.9□□□□□ -1.95
NUP85YJR042W YOL014WQ08110 124 aa2.9□□□□□ -1.95
NUP85YJR042W ZEO1Q08245 113 aa2.9□□□□□ -1.95
NUP85YJR042W SMT3Q12306 101 aaKnown RBP2.9□□□□□ -1.95
NUP85YJR042W JID1Q12350 301 aa2.9□□□□□ -1.95
NUP85YJR042W PCC1Q3E833 88 aa2.9□□□□□ -1.95
NUP85YJR042W TIR1P10863 254 aa2.89□□□□□ -1.95
NUP85YJR042W PCL1P24867 279 aa2.89□□□□□ -1.95
NUP85YJR042W TIF34P40217 347 aaKnown RBP2.89□□□□□ -1.95
NUP85YJR042W SMD3P43321 101 aaKnown RBP2.89□□□□□ -1.95
NUP85YJR042W BUD25P85052 153 aa2.89□□□□□ -1.95
NUP85YJR042W NCE101Q02820 53 aa2.89□□□□□ -1.95
NUP85YJR042W SYM1Q06563 197 aa2.89□□□□□ -1.95
NUP85YJR042W ODC2Q99297 307 aa2.89□□□□□ -1.95
NUP85YJR042W FMT1P32785 401 aa2.89□□□□□ -1.95
NUP85YJR042W SNC2P33328 115 aa2.89□□□□□ -1.95
NUP85YJR042W GTT1P40582 234 aa2.89□□□□□ -1.95
NUP85YJR042W REE1P40893 198 aa2.89□□□□□ -1.95
NUP85YJR042W YDR115WQ04598 105 aa2.89□□□□□ -1.95
NUP85YJR042W TVP18Q04767 167 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms