RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C MHF1Q3E835 90 aa2.98□□□□□ -1.93
PDX1YGR193C PDR10P51533 1564 aa2.98□□□□□ -1.93
PDX1YGR193C YHR139C-AO13536 103 aa2.97□□□□□ -1.93
PDX1YGR193C RAS2P01120 322 aaKnown RBP2.97□□□□□ -1.93
PDX1YGR193C HSP26P15992 214 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
PDX1YGR193C YCR085WP25650 117 aa2.97□□□□□ -1.93
PDX1YGR193C YCR041WP37265 110 aa2.97□□□□□ -1.93
PDX1YGR193C NRG2P38082 220 aa2.97□□□□□ -1.93
PDX1YGR193C PHO88P38264 188 aaPredicted RBP2.97□□□□□ -1.93
PDX1YGR193C HTD2P38790 280 aaKnown RBP2.97□□□□□ -1.93
PDX1YGR193C YHR138CP38841 114 aaPredicted RBP2.97□□□□□ -1.93
PDX1YGR193C SPO73P40031 143 aa2.97□□□□□ -1.93
PDX1YGR193C SPG1P50088 95 aa2.97□□□□□ -1.93
PDX1YGR193C NRM1P53718 249 aa2.97□□□□□ -1.93
PDX1YGR193C SMD1Q02260 146 aaPredicted RBP2.97□□□□□ -1.93
PDX1YGR193C YLR281CQ05863 155 aa2.97□□□□□ -1.93
PDX1YGR193C SNX3Q08826 162 aaKnown RBP2.97□□□□□ -1.93
PDX1YGR193C PDR12Q02785 1511 aa2.97□□□□□ -1.93
PDX1YGR193C POR1P04840 283 aaKnown RBP2.96□□□□□ -1.94
PDX1YGR193C YOL162WP0CF19 215 aa2.96□□□□□ -1.94
PDX1YGR193C YAR066WP0CX18 203 aa2.96□□□□□ -1.94
PDX1YGR193C YHR214WP0CX19 203 aa2.96□□□□□ -1.94
PDX1YGR193C UBC4P15731 148 aa2.96□□□□□ -1.94
PDX1YGR193C YCR050CP25630 102 aa2.96□□□□□ -1.94
PDX1YGR193C URA10P30402 227 aa2.96□□□□□ -1.94
PDX1YGR193C SMP1P38128 452 aa2.96□□□□□ -1.94
PDX1YGR193C YHL018WP38744 120 aaPredicted RBP2.96□□□□□ -1.94
PDX1YGR193C PET8P38921 284 aa2.96□□□□□ -1.94
PDX1YGR193C YNL200CP40165 246 aaKnown RBP2.96□□□□□ -1.94
PDX1YGR193C VPS25P47142 202 aa2.96□□□□□ -1.94
PDX1YGR193C GPI19Q04082 140 aa2.96□□□□□ -1.94
PDX1YGR193C NMA1Q06178 401 aaKnown RBP2.96□□□□□ -1.94
PDX1YGR193C VMA9Q3E7B6 73 aa2.96□□□□□ -1.94
PDX1YGR193C TDA8Q6B2U8 126 aa2.96□□□□□ -1.94
PDX1YGR193C SEC7P11075 2009 aaKnown RBP2.96□□□□□ -1.94
PDX1YGR193C USO1P25386 1790 aa2.95□□□□□ -1.94
PDX1YGR193C GDB1Q06625 1536 aa2.95□□□□□ -1.94
PDX1YGR193C RPL15AP05748 204 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C RPS8AP0CX39 200 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C RPS8BP0CX40 200 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C KRE1P17260 313 aa2.95□□□□□ -1.94
PDX1YGR193C RPL16AP26784 199 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C MID2P36027 376 aa2.95□□□□□ -1.94
PDX1YGR193C YND1P40009 630 aa2.95□□□□□ -1.94
PDX1YGR193C VMA21P41806 77 aa2.95□□□□□ -1.94
PDX1YGR193C DSK2P48510 373 aa2.95□□□□□ -1.94
PDX1YGR193C KNH1P50112 268 aa2.95□□□□□ -1.94
PDX1YGR193C TPC1P53257 314 aa2.95□□□□□ -1.94
PDX1YGR193C TDA7P53882 636 aaPredicted RBP2.95□□□□□ -1.94
PDX1YGR193C RPL15BP54780 204 aaPredicted RBP2.95□□□□□ -1.94
PDX1YGR193C SPG3Q04398 127 aaPredicted RBP2.95□□□□□ -1.94
PDX1YGR193C JID1Q12350 301 aa2.95□□□□□ -1.94
PDX1YGR193C DFM1Q12743 341 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C YPR145C-AQ2V2P0 78 aa2.95□□□□□ -1.94
PDX1YGR193C ENV10Q99382 181 aa2.95□□□□□ -1.94
PDX1YGR193C RPO21P04050 1733 aaKnown RBP2.95□□□□□ -1.94
PDX1YGR193C RPS25BP0C0T4 108 aaKnown RBP2.94□□□□□ -1.94
PDX1YGR193C GPI18P38211 433 aa2.94□□□□□ -1.94
PDX1YGR193C SVP26P38869 228 aa2.94□□□□□ -1.94
PDX1YGR193C EDC2P40023 145 aaPredicted RBP2.94□□□□□ -1.94
PDX1YGR193C NSA2P40078 261 aaKnown RBP2.94□□□□□ -1.94
PDX1YGR193C FLX1P40464 311 aa2.94□□□□□ -1.94
PDX1YGR193C SWT21P53873 357 aaPredicted RBP2.94□□□□□ -1.94
PDX1YGR193C ADD37Q03233 198 aa2.94□□□□□ -1.94
PDX1YGR193C ANT1Q06497 328 aa2.94□□□□□ -1.94
PDX1YGR193C IRC25Q07951 179 aa2.94□□□□□ -1.94
PDX1YGR193C YLR112WQ12130 139 aa2.94□□□□□ -1.94
PDX1YGR193C PCL9Q12477 304 aa2.94□□□□□ -1.94
PDX1YGR193C RPS25AQ3E792 108 aaPredicted RBP2.94□□□□□ -1.94
PDX1YGR193C YFR032C-BQ8TGU2 87 aa2.94□□□□□ -1.94
PDX1YGR193C MIC10Q96VH5 97 aa2.94□□□□□ -1.94
PDX1YGR193C RKR1Q04781 1562 aa2.94□□□□□ -1.94
PDX1YGR193C YRF1-2P40105 1681 aa2.93□□□□□ -1.94
PDX1YGR193C MLP2P40457 1679 aa2.93□□□□□ -1.94
PDX1YGR193C RPL23AP0CX41 137 aaKnown RBP2.93□□□□□ -1.94
PDX1YGR193C RPL23BP0CX42 137 aaKnown RBP2.93□□□□□ -1.94
PDX1YGR193C DDR48P18899 430 aaKnown RBP2.93□□□□□ -1.94
PDX1YGR193C RPA12P32529 125 aaKnown RBP2.93□□□□□ -1.94
PDX1YGR193C GPX1P36014 167 aa2.93□□□□□ -1.94
PDX1YGR193C SWD3P38123 315 aa2.93□□□□□ -1.94
PDX1YGR193C ECM34P38728 170 aa2.93□□□□□ -1.94
PDX1YGR193C TDA2P40045 126 aa2.93□□□□□ -1.94
PDX1YGR193C CDC1P40986 491 aa2.93□□□□□ -1.94
PDX1YGR193C RSM19P53733 91 aaPredicted RBP2.93□□□□□ -1.94
PDX1YGR193C LPP1Q04396 274 aa2.93□□□□□ -1.94
PDX1YGR193C RRT7Q07829 113 aa2.93□□□□□ -1.94
PDX1YGR193C DAD1Q12248 94 aa2.93□□□□□ -1.94
PDX1YGR193C YOR376W-AQ3E805 51 aa2.93□□□□□ -1.94
PDX1YGR193C YBL008W-AQ3E821 79 aa2.93□□□□□ -1.94
PDX1YGR193C VTH1P40438 1549 aa2.93□□□□□ -1.94
PDX1YGR193C VTH2P40890 1549 aa2.93□□□□□ -1.94
PDX1YGR193C CHC1P22137 1653 aaKnown RBP2.92□□□□□ -1.94
PDX1YGR193C MDH2P22133 377 aa2.92□□□□□ -1.94
PDX1YGR193C MAK32P23060 363 aa2.92□□□□□ -1.94
PDX1YGR193C YER135CP40082 130 aa2.92□□□□□ -1.94
PDX1YGR193C YFL019CP43576 117 aa2.92□□□□□ -1.94
PDX1YGR193C YFL015CP43578 164 aa2.92□□□□□ -1.94
PDX1YGR193C YDR102CQ03864 110 aa2.92□□□□□ -1.94
PDX1YGR193C NDD1Q08887 554 aa2.92□□□□□ -1.94
PDX1YGR193C EMC6Q12431 108 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms