RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C RPL14BP38754 138 aaKnown RBP2.42□□□□□ -2.02
MSM1YGR171C CTR2P38865 189 aa2.42□□□□□ -2.02
MSM1YGR171C RPB11P38902 120 aa2.42□□□□□ -2.02
MSM1YGR171C GAA1P39012 614 aa2.42□□□□□ -2.02
MSM1YGR171C SPC25P40014 221 aa2.42□□□□□ -2.02
MSM1YGR171C YER084WP40057 128 aa2.42□□□□□ -2.02
MSM1YGR171C GNA1P43577 159 aaPredicted RBP2.42□□□□□ -2.02
MSM1YGR171C SPG1P50088 95 aa2.42□□□□□ -2.02
MSM1YGR171C ATG10Q07879 167 aa2.42□□□□□ -2.02
MSM1YGR171C RAD28Q12021 506 aa2.42□□□□□ -2.02
MSM1YGR171C AHT1P29589 182 aa2.41□□□□□ -2.02
MSM1YGR171C SRB6P32570 121 aa2.41□□□□□ -2.02
MSM1YGR171C FYV4P38783 130 aaPredicted RBP2.41□□□□□ -2.02
MSM1YGR171C TVP23P38962 199 aa2.41□□□□□ -2.02
MSM1YGR171C EMC4P53073 190 aa2.41□□□□□ -2.02
MSM1YGR171C ATP19P81451 68 aa2.41□□□□□ -2.02
MSM1YGR171C EST3Q03096 181 aa2.41□□□□□ -2.02
MSM1YGR171C UPS1Q05776 175 aa2.41□□□□□ -2.02
MSM1YGR171C FEX1Q08913 375 aa2.41□□□□□ -2.02
MSM1YGR171C FEX2Q08991 375 aa2.41□□□□□ -2.02
MSM1YGR171C SDH4P37298 181 aa2.4□□□□□ -2.02
MSM1YGR171C YEL028WP39989 153 aa2.4□□□□□ -2.02
MSM1YGR171C SAY1P53324 424 aa2.4□□□□□ -2.02
MSM1YGR171C BUD25P85052 153 aa2.4□□□□□ -2.02
MSM1YGR171C LIP1Q03579 150 aa2.4□□□□□ -2.02
MSM1YGR171C PRM7Q12459 698 aa2.4□□□□□ -2.02
MSM1YGR171C YHR213W-AQ8TGT4 77 aa2.4□□□□□ -2.02
MSM1YGR171C PDR11P40550 1411 aa2.4□□□□□ -2.03
MSM1YGR171C KRE1P17260 313 aa2.39□□□□□ -2.03
MSM1YGR171C YRA2P36036 203 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
MSM1YGR171C YJL218WP40892 196 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C YNR064CP53750 290 aa2.39□□□□□ -2.03
MSM1YGR171C ATP20Q12233 115 aa2.39□□□□□ -2.03
MSM1YGR171C MYO2P19524 1574 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C FKS1P38631 1876 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C STF2P16965 84 aa2.39□□□□□ -2.03
MSM1YGR171C EMP24P32803 203 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C YAR029WP39549 74 aa2.39□□□□□ -2.03
MSM1YGR171C YEL073CP39974 107 aa2.39□□□□□ -2.03
MSM1YGR171C RPL33BP41056 107 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C CIS3P47001 227 aa2.39□□□□□ -2.03
MSM1YGR171C BAT2P47176 376 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C MPC1P53157 130 aaKnown RBP2.39□□□□□ -2.03
MSM1YGR171C ATO3Q12359 275 aa2.39□□□□□ -2.03
MSM1YGR171C TY1B-PR2P0C2J0 1756 aa2.38□□□□□ -2.03
MSM1YGR171C COX5BP00425 151 aa2.38□□□□□ -2.03
MSM1YGR171C PAM17P36147 197 aa2.38□□□□□ -2.03
MSM1YGR171C RRT1P38192 103 aa2.38□□□□□ -2.03
MSM1YGR171C HPA3P39979 161 aa2.38□□□□□ -2.03
MSM1YGR171C RPL13BP40212 199 aaKnown RBP2.38□□□□□ -2.03
MSM1YGR171C GEP7P53171 287 aa2.38□□□□□ -2.03
MSM1YGR171C YPL067CQ02754 198 aa2.38□□□□□ -2.03
MSM1YGR171C YDR102CQ03864 110 aa2.38□□□□□ -2.03
MSM1YGR171C YMR103CQ04436 120 aa2.38□□□□□ -2.03
MSM1YGR171C GPI11Q06636 219 aa2.38□□□□□ -2.03
MSM1YGR171C SWC7Q06707 132 aa2.38□□□□□ -2.03
MSM1YGR171C FYV12Q08559 129 aa2.38□□□□□ -2.03
MSM1YGR171C MIG1P27705 504 aa2.37□□□□□ -2.03
MSM1YGR171C FZF1P32805 299 aa2.37□□□□□ -2.03
MSM1YGR171C IPT1P38954 527 aa2.37□□□□□ -2.03
MSM1YGR171C SMD3P43321 101 aaKnown RBP2.37□□□□□ -2.03
MSM1YGR171C KEI1Q06346 221 aa2.37□□□□□ -2.03
MSM1YGR171C YOR097CQ12274 175 aaPredicted RBP2.37□□□□□ -2.03
MSM1YGR171C RPL13AQ12690 199 aaPredicted RBP2.37□□□□□ -2.03
MSM1YGR171C ATG40Q99325 256 aa2.37□□□□□ -2.03
MSM1YGR171C SCC2Q04002 1493 aa2.37□□□□□ -2.03
MSM1YGR171C CAT8P39113 1433 aa2.37□□□□□ -2.03
MSM1YGR171C HAP1P0CE41 1502 aa2.37□□□□□ -2.03
MSM1YGR171C YPR096CO13587 100 aa2.37□□□□□ -2.03
MSM1YGR171C YFR010W-AP0C5N0 62 aa2.37□□□□□ -2.03
MSM1YGR171C HAP3P13434 144 aa2.37□□□□□ -2.03
MSM1YGR171C MRS4P23500 304 aa2.37□□□□□ -2.03
MSM1YGR171C YBR013CP38215 129 aa2.37□□□□□ -2.03
MSM1YGR171C YBR209WP38311 105 aa2.37□□□□□ -2.03
MSM1YGR171C YHR180WP38868 163 aa2.37□□□□□ -2.03
MSM1YGR171C MPM1P40364 252 aa2.37□□□□□ -2.03
MSM1YGR171C TIR3P40552 269 aa2.37□□□□□ -2.03
MSM1YGR171C GAT4P40569 121 aa2.37□□□□□ -2.03
MSM1YGR171C PHS1P40857 217 aa2.37□□□□□ -2.03
MSM1YGR171C RCE1Q03530 315 aa2.37□□□□□ -2.03
MSM1YGR171C IRC23Q08416 157 aa2.37□□□□□ -2.03
MSM1YGR171C YOR015WQ12169 119 aa2.37□□□□□ -2.03
MSM1YGR171C HMRA1P0CY11 126 aa2.36□□□□□ -2.03
MSM1YGR171C CLB6P32943 380 aa2.36□□□□□ -2.03
MSM1YGR171C SFT2P38166 215 aa2.36□□□□□ -2.03
MSM1YGR171C YNL217WP40152 326 aa2.36□□□□□ -2.03
MSM1YGR171C CCS1P40202 249 aaKnown RBP2.36□□□□□ -2.03
MSM1YGR171C PAM16P42949 149 aa2.36□□□□□ -2.03
MSM1YGR171C YGR164WP53291 111 aa2.36□□□□□ -2.03
MSM1YGR171C MPC3P53311 146 aa2.36□□□□□ -2.03
MSM1YGR171C PIR1Q03178 341 aa2.36□□□□□ -2.03
MSM1YGR171C CUE4Q04201 117 aaPredicted RBP2.36□□□□□ -2.03
MSM1YGR171C YMR252CQ04814 134 aa2.36□□□□□ -2.03
MSM1YGR171C ANT1Q06497 328 aa2.36□□□□□ -2.03
MSM1YGR171C DDP1Q99321 188 aaKnown RBP2.36□□□□□ -2.03
MSM1YGR171C ESC1Q03661 1658 aaKnown RBP2.36□□□□□ -2.03
MSM1YGR171C TY1B-DR1Q03855 1755 aa2.35□□□□□ -2.03
MSM1YGR171C TY1B-DR3Q99231 1755 aa2.35□□□□□ -2.03
MSM1YGR171C RAS2P01120 322 aaKnown RBP2.35□□□□□ -2.03
MSM1YGR171C RPL26AP05743 127 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms