RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YDL241WQ07738 123 aa1.19□□□□□ -2.22
VAB2YEL005C QCR6P00127 147 aa1.18□□□□□ -2.22
VAB2YEL005C YGL041W-AP0C5N3 154 aa1.18□□□□□ -2.22
VAB2YEL005C EFM5P53200 248 aaKnown RBP1.18□□□□□ -2.22
VAB2YEL005C SMD2Q06217 110 aaKnown RBP1.18□□□□□ -2.22
VAB2YEL005C VAM10Q08474 114 aa1.18□□□□□ -2.22
VAB2YEL005C CCW12Q12127 133 aa1.18□□□□□ -2.22
VAB2YEL005C FCY1Q12178 158 aa1.18□□□□□ -2.22
VAB2YEL005C PET20Q99373 253 aa1.18□□□□□ -2.22
VAB2YEL005C PHO13P19881 312 aa1.17□□□□□ -2.22
VAB2YEL005C SRP21P32342 167 aa1.17□□□□□ -2.22
VAB2YEL005C YEL014CP39999 101 aa1.17□□□□□ -2.22
VAB2YEL005C VMA10P48836 114 aaKnown RBP1.17□□□□□ -2.22
VAB2YEL005C RCF2P53721 224 aa1.17□□□□□ -2.22
VAB2YEL005C PKR1Q03880 122 aaKnown RBP1.17□□□□□ -2.22
VAB2YEL005C RAV2Q03956 351 aa1.17□□□□□ -2.22
VAB2YEL005C RFU1Q08003 200 aa1.17□□□□□ -2.22
VAB2YEL005C HYP2P23301 157 aaKnown RBP1.16□□□□□ -2.22
VAB2YEL005C MRS4P23500 304 aa1.16□□□□□ -2.22
VAB2YEL005C UGX2P32772 223 aa1.16□□□□□ -2.22
VAB2YEL005C MRPL24P36525 258 aaPredicted RBP1.16□□□□□ -2.22
VAB2YEL005C AIM36Q03798 255 aa1.16□□□□□ -2.22
VAB2YEL005C SCS22Q6Q595 175 aa1.16□□□□□ -2.22
VAB2YEL005C RIF1P29539 1916 aa1.16□□□□□ -2.22
VAB2YEL005C MOG1P47123 218 aa1.15□□□□□ -2.23
VAB2YEL005C TMA23Q03525 211 aa1.15□□□□□ -2.23
VAB2YEL005C FMP49A0A023PZB3 126 aa1.14□□□□□ -2.23
VAB2YEL005C GPI2P46961 280 aa1.14□□□□□ -2.23
VAB2YEL005C IRC19Q07843 230 aa1.14□□□□□ -2.23
VAB2YEL005C YER188C-AP0C0V2 99 aa1.13□□□□□ -2.23
VAB2YEL005C DDR48P18899 430 aaKnown RBP1.13□□□□□ -2.23
VAB2YEL005C YBR027CP38220 110 aa1.13□□□□□ -2.23
VAB2YEL005C CMC4Q3E7A9 73 aa1.13□□□□□ -2.23
VAB2YEL005C PET54P10834 293 aa1.12□□□□□ -2.23
VAB2YEL005C HSP12P22943 109 aaKnown RBP1.12□□□□□ -2.23
VAB2YEL005C IPI1P38803 334 aaPredicted RBP1.12□□□□□ -2.23
VAB2YEL005C YJL218WP40892 196 aaKnown RBP1.12□□□□□ -2.23
VAB2YEL005C EST3Q03096 181 aa1.12□□□□□ -2.23
VAB2YEL005C YPR153WQ06537 140 aa1.12□□□□□ -2.23
VAB2YEL005C HSP150P32478 413 aa1.11□□□□□ -2.23
VAB2YEL005C ATG8P38182 117 aaRIP-Chip data1.11□□□□□ -2.23not detected
VAB2YEL005C IPT1P38954 527 aa1.11□□□□□ -2.23
VAB2YEL005C GPI11Q06636 219 aa1.11□□□□□ -2.23
VAB2YEL005C YOR072WQ08486 104 aa1.11□□□□□ -2.23
VAB2YEL005C YOR1P53049 1477 aa1.11□□□□□ -2.23
VAB2YEL005C NHP6AP11632 93 aaKnown RBP1.1□□□□□ -2.23
VAB2YEL005C YCR001WP25347 104 aa1.1□□□□□ -2.23
VAB2YEL005C YDR366CP87287 132 aa1.1□□□□□ -2.23
VAB2YEL005C RPC19P28000 142 aaKnown RBP1.09□□□□□ -2.23
VAB2YEL005C RBL2P48606 106 aaKnown RBP1.09□□□□□ -2.23
VAB2YEL005C HUT1Q12520 339 aa1.09□□□□□ -2.23
VAB2YEL005C MHF1Q3E835 90 aa1.09□□□□□ -2.23
VAB2YEL005C RIB3Q99258 208 aa1.09□□□□□ -2.23
VAB2YEL005C HAP2P06774 265 aa1.08□□□□□ -2.24
VAB2YEL005C YOL013W-AP0C272 63 aaPredicted RBP1.08□□□□□ -2.24
VAB2YEL005C SED1Q01589 338 aa1.08□□□□□ -2.24
VAB2YEL005C RPL33AP05744 107 aaKnown RBP1.07□□□□□ -2.24
VAB2YEL005C SUI1P32911 108 aaKnown RBP1.07□□□□□ -2.24
VAB2YEL005C LSM1P47017 172 aaKnown RBP1.07□□□□□ -2.24
VAB2YEL005C SPG1P50088 95 aa1.07□□□□□ -2.24
VAB2YEL005C YNL122CP53921 115 aaPredicted RBP1.07□□□□□ -2.24
VAB2YEL005C SRL3P36167 246 aa1.06□□□□□ -2.24
VAB2YEL005C YAP3P38749 330 aa1.06□□□□□ -2.24
VAB2YEL005C YGR201CP42936 225 aa1.06□□□□□ -2.24
VAB2YEL005C LSM8P47093 109 aaKnown RBP1.06□□□□□ -2.24
VAB2YEL005C DIE2P50076 525 aa1.06□□□□□ -2.24
VAB2YEL005C HHO1P53551 258 aa1.06□□□□□ -2.24
VAB2YEL005C YCL001W-AP87012 153 aa1.06□□□□□ -2.24
VAB2YEL005C SEN15Q04675 128 aa1.06□□□□□ -2.24
VAB2YEL005C IRC21Q04772 201 aa1.06□□□□□ -2.24
VAB2YEL005C YHR213W-BQ8TGK1 99 aa1.06□□□□□ -2.24
VAB2YEL005C COX5BP00425 151 aa1.05□□□□□ -2.24
VAB2YEL005C YGR039WP53225 103 aa1.05□□□□□ -2.24
VAB2YEL005C COF1Q03048 143 aaKnown RBP1.05□□□□□ -2.24
VAB2YEL005C RAF1Q06891 181 aa1.05□□□□□ -2.24
VAB2YEL005C KTI11Q3E840 82 aa1.05□□□□□ -2.24
VAB2YEL005C HSL1P34244 1518 aa1.05□□□□□ -2.24
VAB2YEL005C RPS22AP0C0W1 130 aaKnown RBP1.04□□□□□ -2.24
VAB2YEL005C RPS1BP23248 255 aaKnown RBP1.04□□□□□ -2.24
VAB2YEL005C FYV5P25585 152 aa1.04□□□□□ -2.24
VAB2YEL005C YMR320WQ04897 101 aa1.04□□□□□ -2.24
VAB2YEL005C RPS22BQ3E7Y3 130 aaKnown RBP1.04□□□□□ -2.24
VAB2YEL005C HHY1P39982 102 aa1.03□□□□□ -2.24
VAB2YEL005C YJL009WP47078 108 aa1.03□□□□□ -2.24
VAB2YEL005C SOM1Q05676 74 aa1.03□□□□□ -2.24
VAB2YEL005C NAT5Q08689 176 aa1.03□□□□□ -2.24
VAB2YEL005C YGL014C-AP0C5N1 53 aa1.02□□□□□ -2.25
VAB2YEL005C UBR1P19812 1950 aa1.02□□□□□ -2.25
VAB2YEL005C MRPL44P19956 98 aa1.02□□□□□ -2.25
VAB2YEL005C HFA1P32874 2273 aa1.02□□□□□ -2.25
VAB2YEL005C PHB1P40961 287 aa1.02□□□□□ -2.25
VAB2YEL005C ROM2P51862 1356 aaKnown RBP1.02□□□□□ -2.25
VAB2YEL005C YNL019CP53975 284 aa1.02□□□□□ -2.25
VAB2YEL005C MGR2Q02889 113 aa1.02□□□□□ -2.25
VAB2YEL005C DDP1Q99321 188 aaKnown RBP1.02□□□□□ -2.25
VAB2YEL005C ANB1P19211 157 aa1.01□□□□□ -2.25
VAB2YEL005C CDC39P25655 2108 aaKnown RBP1□□□□□ -2.25
VAB2YEL005C FUN14P18411 198 aa1□□□□□ -2.25
VAB2YEL005C EMC4P53073 190 aa1□□□□□ -2.25
VAB2YEL005C SPC3Q12133 184 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms