RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W UGX2P32772 223 aa1.56□□□□□ -2.16
NSE3YDR288W ECM31P38122 312 aa1.56□□□□□ -2.16
NSE3YDR288W NMA1Q06178 401 aaKnown RBP1.56□□□□□ -2.16
NSE3YDR288W RRT7Q07829 113 aa1.56□□□□□ -2.16
NSE3YDR288W FMP49A0A023PZB3 126 aa1.55□□□□□ -2.16
NSE3YDR288W RCF2P53721 224 aa1.55□□□□□ -2.16
NSE3YDR288W SLH1P53327 1967 aaKnown RBP1.54□□□□□ -2.16
NSE3YDR288W MRS4P23500 304 aa1.54□□□□□ -2.16
NSE3YDR288W HSP150P32478 413 aa1.54□□□□□ -2.16
NSE3YDR288W YBR027CP38220 110 aa1.54□□□□□ -2.16
NSE3YDR288W ATP19P81451 68 aa1.54□□□□□ -2.16
NSE3YDR288W CMC4Q3E7A9 73 aa1.54□□□□□ -2.16
NSE3YDR288W YER181CP40097 107 aa1.53□□□□□ -2.16
NSE3YDR288W GLC8P41818 229 aa1.53□□□□□ -2.16
NSE3YDR288W HYP2P23301 157 aaKnown RBP1.52□□□□□ -2.17
NSE3YDR288W RFU1Q08003 200 aa1.52□□□□□ -2.17
NSE3YDR288W PET20Q99373 253 aa1.52□□□□□ -2.17
NSE3YDR288W PHO13P19881 312 aa1.51□□□□□ -2.17
NSE3YDR288W TMA23Q03525 211 aa1.51□□□□□ -2.17
NSE3YDR288W YCR001WP25347 104 aa1.5□□□□□ -2.17
NSE3YDR288W MRPL24P36525 258 aaPredicted RBP1.5□□□□□ -2.17
NSE3YDR288W YJL218WP40892 196 aaKnown RBP1.5□□□□□ -2.17
NSE3YDR288W IRC19Q07843 230 aa1.5□□□□□ -2.17
NSE3YDR288W SRP21P32342 167 aa1.49□□□□□ -2.17
NSE3YDR288W IPT1P38954 527 aa1.49□□□□□ -2.17
NSE3YDR288W ARC19P33204 171 aaKnown RBP1.48□□□□□ -2.17
NSE3YDR288W RAV2Q03956 351 aa1.47□□□□□ -2.17
NSE3YDR288W SMD2Q06217 110 aaKnown RBP1.47□□□□□ -2.17
NSE3YDR288W YPR153WQ06537 140 aa1.47□□□□□ -2.17
NSE3YDR288W GPI2P46961 280 aa1.46□□□□□ -2.18
NSE3YDR288W YNL122CP53921 115 aaPredicted RBP1.46□□□□□ -2.18
NSE3YDR288W YOL013W-AP0C272 63 aaPredicted RBP1.45□□□□□ -2.18
NSE3YDR288W EST3Q03096 181 aa1.45□□□□□ -2.18
NSE3YDR288W PET54P10834 293 aa1.44□□□□□ -2.18
NSE3YDR288W SED1Q01589 338 aa1.44□□□□□ -2.18
NSE3YDR288W PKR1Q03880 122 aaKnown RBP1.44□□□□□ -2.18
NSE3YDR288W GPI11Q06636 219 aa1.44□□□□□ -2.18
NSE3YDR288W SCS22Q6Q595 175 aa1.44□□□□□ -2.18
NSE3YDR288W DDR48P18899 430 aaKnown RBP1.43□□□□□ -2.18
NSE3YDR288W NHP6AP11632 93 aaKnown RBP1.42□□□□□ -2.18
NSE3YDR288W YOR072WQ08486 104 aa1.42□□□□□ -2.18
NSE3YDR288W HSP12P22943 109 aaKnown RBP1.41□□□□□ -2.18
NSE3YDR288W ATG8P38182 117 aaRIP-Chip data1.4□□□□□ -2.19not detected
NSE3YDR288W RPL33AP05744 107 aaKnown RBP1.39□□□□□ -2.19
NSE3YDR288W HAP2P06774 265 aa1.39□□□□□ -2.19
NSE3YDR288W SRL3P36167 246 aa1.39□□□□□ -2.19
NSE3YDR288W VMA10P48836 114 aaKnown RBP1.39□□□□□ -2.19
NSE3YDR288W EFM5P53200 248 aaKnown RBP1.39□□□□□ -2.19
NSE3YDR288W HUT1Q12520 339 aa1.39□□□□□ -2.19
NSE3YDR288W YHR213W-BQ8TGK1 99 aa1.39□□□□□ -2.19
NSE3YDR288W IPI1P38803 334 aaPredicted RBP1.38□□□□□ -2.19
NSE3YDR288W YOR1P53049 1477 aa1.37□□□□□ -2.19
NSE3YDR288W MOG1P47123 218 aa1.37□□□□□ -2.19
NSE3YDR288W MGR2Q02889 113 aa1.37□□□□□ -2.19
NSE3YDR288W RIF1P29539 1916 aa1.36□□□□□ -2.19
NSE3YDR288W ROM2P51862 1356 aaKnown RBP1.36□□□□□ -2.19
NSE3YDR288W HSL1P34244 1518 aa1.36□□□□□ -2.19
NSE3YDR288W RPS22AP0C0W1 130 aaKnown RBP1.36□□□□□ -2.19
NSE3YDR288W RPS22BQ3E7Y3 130 aaKnown RBP1.36□□□□□ -2.19
NSE3YDR288W COX5BP00425 151 aa1.34□□□□□ -2.19
NSE3YDR288W SUI1P32911 108 aaKnown RBP1.34□□□□□ -2.19
NSE3YDR288W HHY1P39982 102 aa1.34□□□□□ -2.19
NSE3YDR288W YDR366CP87287 132 aa1.34□□□□□ -2.19
NSE3YDR288W SEN15Q04675 128 aa1.34□□□□□ -2.19
NSE3YDR288W IRC21Q04772 201 aa1.34□□□□□ -2.19
NSE3YDR288W YAP3P38749 330 aa1.33□□□□□ -2.2
NSE3YDR288W YJL009WP47078 108 aa1.33□□□□□ -2.2
NSE3YDR288W RAF1Q06891 181 aa1.33□□□□□ -2.2
NSE3YDR288W YGR201CP42936 225 aa1.32□□□□□ -2.2
NSE3YDR288W DIE2P50076 525 aa1.32□□□□□ -2.2
NSE3YDR288W RIB3Q99258 208 aa1.32□□□□□ -2.2
NSE3YDR288W DDP1Q99321 188 aaKnown RBP1.32□□□□□ -2.2
NSE3YDR288W RPS1BP23248 255 aaKnown RBP1.31□□□□□ -2.2
NSE3YDR288W FYV5P25585 152 aa1.31□□□□□ -2.2
NSE3YDR288W SPG1P50088 95 aa1.31□□□□□ -2.2
NSE3YDR288W YCL001W-AP87012 153 aa1.31□□□□□ -2.2
NSE3YDR288W MHF1Q3E835 90 aa1.31□□□□□ -2.2
NSE3YDR288W YGL014C-AP0C5N1 53 aa1.3□□□□□ -2.2
NSE3YDR288W LSM1P47017 172 aaKnown RBP1.3□□□□□ -2.2
NSE3YDR288W HHO1P53551 258 aa1.3□□□□□ -2.2
NSE3YDR288W SOM1Q05676 74 aa1.3□□□□□ -2.2
NSE3YDR288W QCR6P00127 147 aa1.29□□□□□ -2.2
NSE3YDR288W LSM8P47093 109 aaKnown RBP1.29□□□□□ -2.2
NSE3YDR288W PHB1P40961 287 aa1.28□□□□□ -2.2
NSE3YDR288W YMR320WQ04897 101 aa1.28□□□□□ -2.2
NSE3YDR288W HFA1P32874 2273 aa1.27□□□□□ -2.21
NSE3YDR288W YNL019CP53975 284 aa1.27□□□□□ -2.21
NSE3YDR288W YMR122CQ03879 124 aa1.27□□□□□ -2.21
NSE3YDR288W NAT5Q08689 176 aa1.27□□□□□ -2.21
NSE3YDR288W ANB1P19211 157 aa1.26□□□□□ -2.21
NSE3YDR288W RBL2P48606 106 aaKnown RBP1.26□□□□□ -2.21
NSE3YDR288W COF1Q03048 143 aaKnown RBP1.26□□□□□ -2.21
NSE3YDR288W LST8P41318 303 aa1.25□□□□□ -2.21
NSE3YDR288W YGR039WP53225 103 aa1.25□□□□□ -2.21
NSE3YDR288W YOR385WQ08909 290 aa1.25□□□□□ -2.21
NSE3YDR288W SPC3Q12133 184 aa1.25□□□□□ -2.21
NSE3YDR288W YHR213WP0CI67 198 aa1.23□□□□□ -2.21
NSE3YDR288W MRPL44P19956 98 aa1.23□□□□□ -2.21
NSE3YDR288W SFT2P38166 215 aa1.23□□□□□ -2.21
NSE3YDR288W UBR1P19812 1950 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms