RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C HSK3P69852 69 aa-0.07□□□□□ -2.42
SNU56YDR240C NMA1Q06178 401 aaKnown RBP-0.07□□□□□ -2.42
SNU56YDR240C PEX11Q12462 236 aa-0.07□□□□□ -2.42
SNU56YDR240C IPI1P38803 334 aaPredicted RBP-0.08□□□□□ -2.42
SNU56YDR240C YIP3P53633 176 aa-0.08□□□□□ -2.42
SNU56YDR240C YDR102CQ03864 110 aa-0.08□□□□□ -2.42
SNU56YDR240C YGL041W-AP0C5N3 154 aa-0.09□□□□□ -2.42
SNU56YDR240C FUN14P18411 198 aa-0.09□□□□□ -2.42
SNU56YDR240C MRS4P23500 304 aa-0.09□□□□□ -2.42
SNU56YDR240C PEX34P25584 144 aa-0.09□□□□□ -2.42
SNU56YDR240C ATP19P81451 68 aa-0.09□□□□□ -2.42
SNU56YDR240C TRR1P29509 319 aaKnown RBP-0.1□□□□□ -2.42
SNU56YDR240C ATP7P30902 174 aa-0.1□□□□□ -2.42
SNU56YDR240C DIE2P50076 525 aa-0.1□□□□□ -2.42
SNU56YDR240C ORM1P53224 222 aa-0.1□□□□□ -2.42
SNU56YDR240C IRC19Q07843 230 aa-0.1□□□□□ -2.42
SNU56YDR240C HUG1Q6Q5K6 68 aa-0.1□□□□□ -2.42
SNU56YDR240C MYO1P08964 1928 aa-0.1□□□□□ -2.43
SNU56YDR240C FAS2P19097 1887 aaKnown RBP-0.1□□□□□ -2.43
SNU56YDR240C ATP5P09457 212 aa-0.1□□□□□ -2.43
SNU56YDR240C RAD51P25454 400 aa-0.1□□□□□ -2.43
SNU56YDR240C RCF2P53721 224 aa-0.1□□□□□ -2.43
SNU56YDR240C YNL140CP53910 189 aa-0.1□□□□□ -2.43
SNU56YDR240C EST3Q03096 181 aa-0.1□□□□□ -2.43
SNU56YDR240C SPA2P23201 1466 aaKnown RBP-0.1□□□□□ -2.43
SNU56YDR240C UBR1P19812 1950 aa-0.11□□□□□ -2.43
SNU56YDR240C YGL014C-AP0C5N1 53 aa-0.11□□□□□ -2.43
SNU56YDR240C SRP14P38985 146 aa-0.11□□□□□ -2.43
SNU56YDR240C YGL101WP53144 215 aa-0.11□□□□□ -2.43
SNU56YDR240C GPI11Q06636 219 aa-0.11□□□□□ -2.43
SNU56YDR240C YLR050CQ12155 161 aaKnown RBP-0.11□□□□□ -2.43
SNU56YDR240C YLR046CQ12253 270 aa-0.11□□□□□ -2.43
SNU56YDR240C MHF1Q3E835 90 aa-0.11□□□□□ -2.43
SNU56YDR240C MED11Q99278 115 aa-0.11□□□□□ -2.43
SNU56YDR240C SNF2P22082 1703 aa-0.12□□□□□ -2.43
SNU56YDR240C SRP21P32342 167 aa-0.12□□□□□ -2.43
SNU56YDR240C FES1P38260 290 aa-0.12□□□□□ -2.43
SNU56YDR240C SEC72P39742 193 aaKnown RBP-0.12□□□□□ -2.43
SNU56YDR240C EMC4P53073 190 aa-0.12□□□□□ -2.43
SNU56YDR240C YGL193CP53097 103 aa-0.12□□□□□ -2.43
SNU56YDR240C TMA20P89886 181 aaPredicted RBP-0.12□□□□□ -2.43
SNU56YDR240C YPR153WQ06537 140 aa-0.12□□□□□ -2.43
SNU56YDR240C YPD1Q07688 167 aa-0.12□□□□□ -2.43
SNU56YDR240C RFU1Q08003 200 aa-0.12□□□□□ -2.43
SNU56YDR240C CMD1P06787 147 aaKnown RBP-0.13□□□□□ -2.43
SNU56YDR240C UBI4P0CG63 381 aaKnown RBP-0.13□□□□□ -2.43
SNU56YDR240C FIP1P45976 327 aa-0.13□□□□□ -2.43
SNU56YDR240C GPI2P46961 280 aa-0.13□□□□□ -2.43
SNU56YDR240C YMR122CQ03879 124 aa-0.13□□□□□ -2.43
SNU56YDR240C COX5BP00425 151 aa-0.14□□□□□ -2.43
SNU56YDR240C RPL35AP0CX84 120 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C RPL35BP0CX85 120 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C NHP6AP11632 93 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C RPL30P14120 105 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C YER121WP40076 114 aa-0.14□□□□□ -2.43
SNU56YDR240C YJL218WP40892 196 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C FIT3Q08907 204 aa-0.14□□□□□ -2.43
SNU56YDR240C YPR202WQ08993 238 aa-0.14□□□□□ -2.43
SNU56YDR240C HUT1Q12520 339 aa-0.14□□□□□ -2.43
SNU56YDR240C POR2P40478 281 aa-0.15□□□□□ -2.43
SNU56YDR240C LST8P41318 303 aa-0.15□□□□□ -2.43
SNU56YDR240C GIM3P53900 129 aa-0.15□□□□□ -2.43
SNU56YDR240C LSM3P57743 89 aaKnown RBP-0.15□□□□□ -2.43
SNU56YDR240C SAC3P46674 1301 aa-0.15□□□□□ -2.43
SNU56YDR240C DDR48P18899 430 aaKnown RBP-0.16□□□□□ -2.43
SNU56YDR240C MRPL24P36525 258 aaPredicted RBP-0.16□□□□□ -2.43
SNU56YDR240C AIM4P38305 123 aaPredicted RBP-0.16□□□□□ -2.43
SNU56YDR240C EGD2P38879 174 aaKnown RBP-0.16□□□□□ -2.43
SNU56YDR240C COA4Q05809 96 aa-0.16□□□□□ -2.43
SNU56YDR240C RRT7Q07829 113 aa-0.16□□□□□ -2.43
SNU56YDR240C RDI1Q12434 202 aa-0.16□□□□□ -2.43
SNU56YDR240C RPL40AP0CH08 128 aaKnown RBP-0.16□□□□□ -2.44
SNU56YDR240C RPL40BP0CH09 128 aaKnown RBP-0.16□□□□□ -2.44
SNU56YDR240C YER181CP40097 107 aa-0.16□□□□□ -2.44
SNU56YDR240C DLS1P40366 167 aa-0.16□□□□□ -2.44
SNU56YDR240C YNL019CP53975 284 aa-0.16□□□□□ -2.44
SNU56YDR240C SCS22Q6Q595 175 aa-0.16□□□□□ -2.44
SNU56YDR240C NMT1P14743 455 aa-0.17□□□□□ -2.44
SNU56YDR240C ANB1P19211 157 aa-0.17□□□□□ -2.44
SNU56YDR240C FYV5P25585 152 aa-0.17□□□□□ -2.44
SNU56YDR240C YBR013CP38215 129 aa-0.17□□□□□ -2.44
SNU56YDR240C MIC27P50945 234 aa-0.17□□□□□ -2.44
SNU56YDR240C YCL001W-AP87012 153 aa-0.17□□□□□ -2.44
SNU56YDR240C PFY1P07274 126 aa-0.18□□□□□ -2.44
SNU56YDR240C YHR213WP0CI67 198 aa-0.18□□□□□ -2.44
SNU56YDR240C AUA1P32450 94 aa-0.18□□□□□ -2.44
SNU56YDR240C APQ12P40532 138 aa-0.18□□□□□ -2.44
SNU56YDR240C ARL3Q02804 198 aa-0.18□□□□□ -2.44
SNU56YDR240C ATP14Q12349 124 aa-0.18□□□□□ -2.44
SNU56YDR240C MRPL31P14063 131 aaPredicted RBP-0.19□□□□□ -2.44
SNU56YDR240C RPS1BP23248 255 aaKnown RBP-0.19□□□□□ -2.44
SNU56YDR240C GIM5Q04493 163 aa-0.19□□□□□ -2.44
SNU56YDR240C YLR194CQ05777 254 aa-0.19□□□□□ -2.44
SNU56YDR240C YLR053CQ12026 108 aa-0.19□□□□□ -2.44
SNU56YDR240C YSF3P0C074 85 aaPredicted RBP-0.2□□□□□ -2.44
SNU56YDR240C RME1P32338 300 aaKnown RBP-0.2□□□□□ -2.44
SNU56YDR240C UTP11P34247 250 aaPredicted RBP-0.2□□□□□ -2.44
SNU56YDR240C ATX1P38636 73 aa-0.2□□□□□ -2.44
SNU56YDR240C PHB1P40961 287 aa-0.2□□□□□ -2.44
SNU56YDR240C VPS55P47111 140 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms