RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	YIL163C	P40448	117 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	CUP9	P41817	306 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	TDA4	P47153	279 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	BRP1	P53194	125 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	CDH1	P53197	566 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	MSO1	P53604	210 aa	Known RBP	4.41	□□□□□ -1.7
DBF4	YDR052C	YNR071C	P53757	342 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	RRG8	Q06109	277 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	HPA2	Q06592	156 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	YLR042C	Q07990	161 aa		4.41	□□□□□ -1.7
DBF4	YDR052C	YPT10	P38146	199 aa		4.4	□□□□□ -1.7
DBF4	YDR052C	MRPL49	P40858	161 aa	Predicted RBP	4.4	□□□□□ -1.7
DBF4	YDR052C	BRR6	P53062	197 aa		4.4	□□□□□ -1.7
DBF4	YDR052C	YGL118C	P53132	145 aa		4.4	□□□□□ -1.7
DBF4	YDR052C	ERG13	P54839	491 aa	Known RBP	4.4	□□□□□ -1.7
DBF4	YDR052C	MIX17	Q03667	156 aa		4.4	□□□□□ -1.7
DBF4	YDR052C	RDL2	Q08742	149 aa	Known RBP	4.4	□□□□□ -1.7
DBF4	YDR052C	YPL264C	Q08980	353 aa		4.4	□□□□□ -1.7
DBF4	YDR052C	RPS22A	P0C0W1	130 aa	Known RBP	4.4	□□□□□ -1.71
DBF4	YDR052C	GON7	P46984	123 aa		4.4	□□□□□ -1.71
DBF4	YDR052C	OGG1	P53397	376 aa	Predicted RBP	4.4	□□□□□ -1.71
DBF4	YDR052C	YPL039W	Q03080	316 aa		4.4	□□□□□ -1.71
DBF4	YDR052C	DAP1	Q12091	152 aa		4.4	□□□□□ -1.71
DBF4	YDR052C	DFM1	Q12743	341 aa	Known RBP	4.4	□□□□□ -1.71
DBF4	YDR052C	FUB1	P25659	250 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	RPA12	P32529	125 aa	Known RBP	4.39	□□□□□ -1.71
DBF4	YDR052C	ECM34	P38728	170 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	DFG10	P40526	253 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	CPD1	P53314	239 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	YNR064C	P53750	290 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	AQR1	P53943	586 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	AIM11	P87275	137 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	UPS1	Q05776	175 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	GEP3	Q08622	556 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	CSR2	Q12734	1121 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	YFL041W-A	Q3E817	63 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	ERG2	P32352	222 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	ECM15	P35195	104 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	PRS4	P38063	326 aa	Predicted RBP	4.39	□□□□□ -1.71
DBF4	YDR052C	IML3	P38265	245 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	OM14	P38325	134 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	GEP7	P53171	287 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	CAX4	P53223	239 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	SNP1	Q00916	300 aa	Predicted RBP	4.39	□□□□□ -1.71
DBF4	YDR052C	MSA1	Q08471	629 aa		4.39	□□□□□ -1.71
DBF4	YDR052C	YNL143C	P53908	130 aa		4.38	□□□□□ -1.71
DBF4	YDR052C	YDR042C	Q03205	200 aa		4.38	□□□□□ -1.71
DBF4	YDR052C	YMR103C	Q04436	120 aa		4.38	□□□□□ -1.71
DBF4	YDR052C	USV1	Q12132	391 aa		4.38	□□□□□ -1.71
DBF4	YDR052C	YCL021W-A	Q96VH3	125 aa		4.38	□□□□□ -1.71
DBF4	YDR052C	YIL014C-A	Q02598	104 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	YDL180W	Q12301	547 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	YMR316C-A	I2HB70	103 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	MLF3	P32047	452 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	MST28	P39552	234 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	YGR269W	P40326	108 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	SDS23	P53172	527 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	TPC1	P53257	314 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	YMR007W	Q03675	126 aa		4.37	□□□□□ -1.71
DBF4	YDR052C	CYR1	P08678	2026 aa	Known RBP	4.37	□□□□□ -1.71
DBF4	YDR052C	MDM10	P18409	493 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	YKR041W	P36134	250 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	GPI19	Q04082	140 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	MCH4	Q08268	501 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	HNT3	Q08702	217 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	RPS21B	Q3E754	87 aa	Known RBP	4.36	□□□□□ -1.71
DBF4	YDR052C	YMR31	P19955	123 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	QCR9	P22289	66 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	YSR3	P23501	404 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	QRI5	P32344	111 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	NRG2	P38082	220 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	UBC9	P50623	157 aa	Predicted RBP	4.36	□□□□□ -1.71
DBF4	YDR052C	YLR152C	P54072	576 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	SNT309	Q06091	175 aa	Predicted RBP	4.36	□□□□□ -1.71
DBF4	YDR052C	YOR292C	Q08743	309 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	DAD1	Q12248	94 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	MPD1	Q12404	318 aa	Known RBP	4.36	□□□□□ -1.71
DBF4	YDR052C	KTI11	Q3E840	82 aa		4.36	□□□□□ -1.71
DBF4	YDR052C	HST4	P53688	370 aa		4.35	□□□□□ -1.71
DBF4	YDR052C	COF1	Q03048	143 aa	Known RBP	4.35	□□□□□ -1.71
DBF4	YDR052C	HPF1	Q05164	967 aa		4.35	□□□□□ -1.71
DBF4	YDR052C	RPL23A	P0CX41	137 aa	Known RBP	4.34	□□□□□ -1.71
DBF4	YDR052C	RPL23B	P0CX42	137 aa	Known RBP	4.34	□□□□□ -1.71
DBF4	YDR052C	YCR050C	P25630	102 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	REC114	P32841	428 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	REC104	P33323	182 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	RPP1	P38786	293 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	TIM17	P39515	158 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	YER181C	P40097	107 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	YDL211C	Q12121	372 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	YPS3	Q12303	508 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	RPL2A	P0CX45	254 aa	Known RBP	4.34	□□□□□ -1.71
DBF4	YDR052C	RPL2B	P0CX46	254 aa	Known RBP	4.34	□□□□□ -1.71
DBF4	YDR052C	TOM40	P23644	387 aa	Known RBP	4.34	□□□□□ -1.71
DBF4	YDR052C	ERV1	P27882	189 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	YPS1	P32329	569 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	SFT2	P38166	215 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	CIS3	P47001	227 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	VPS55	P47111	140 aa		4.34	□□□□□ -1.71
DBF4	YDR052C	DSK2	P48510	373 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms