RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C DAS2Q12084 232 aa1.49□□□□□ -2.17
RRI1YDL216C YDR524C-BQ3E6R4 66 aa1.49□□□□□ -2.17
RRI1YDL216C UBC8P28263 218 aa1.48□□□□□ -2.17
RRI1YDL216C MRPL15P36523 253 aa1.48□□□□□ -2.17
RRI1YDL216C RPL37BP51402 88 aaKnown RBP1.48□□□□□ -2.17
RRI1YDL216C ATP20Q12233 115 aa1.48□□□□□ -2.17
RRI1YDL216C RIF1P29539 1916 aa1.48□□□□□ -2.17
RRI1YDL216C SEC16P48415 2195 aaKnown RBP1.48□□□□□ -2.17
RRI1YDL216C YER188C-AP0C0V2 99 aa1.47□□□□□ -2.17
RRI1YDL216C MET31Q03081 177 aa1.47□□□□□ -2.17
RRI1YDL216C GRX8Q05926 109 aa1.47□□□□□ -2.17
RRI1YDL216C YET3Q07451 203 aa1.47□□□□□ -2.17
RRI1YDL216C SEN2P16658 377 aa1.46□□□□□ -2.18
RRI1YDL216C STF2P16965 84 aa1.46□□□□□ -2.18
RRI1YDL216C AHC2P25649 128 aa1.46□□□□□ -2.18
RRI1YDL216C SBH1P52870 82 aa1.46□□□□□ -2.18
RRI1YDL216C SHH4Q06236 168 aa1.46□□□□□ -2.18
RRI1YDL216C DGK1Q12382 290 aa1.46□□□□□ -2.18
RRI1YDL216C MEC1P38111 2368 aa1.46□□□□□ -2.18
RRI1YDL216C MDN1Q12019 4910 aaKnown RBP1.45□□□□□ -2.18
RRI1YDL216C YBL010CP32788 280 aa1.45□□□□□ -2.18
RRI1YDL216C YBR242WP38331 238 aa1.45□□□□□ -2.18
RRI1YDL216C HOP2P53187 214 aa1.45□□□□□ -2.18
RRI1YDL216C AIM36Q03798 255 aa1.45□□□□□ -2.18
RRI1YDL216C LCL2Q08045 131 aa1.45□□□□□ -2.18
RRI1YDL216C PST2Q12335 198 aaKnown RBP1.45□□□□□ -2.18
RRI1YDL216C YLR422WQ06409 1932 aa1.45□□□□□ -2.18
RRI1YDL216C MAK5P38112 773 aaPredicted RBP1.44□□□□□ -2.18
RRI1YDL216C RRT1P38192 103 aa1.44□□□□□ -2.18
RRI1YDL216C YGL235WP53071 178 aa1.44□□□□□ -2.18
RRI1YDL216C YPR203WQ08994 102 aa1.44□□□□□ -2.18
RRI1YDL216C DYN1P36022 4092 aa1.44□□□□□ -2.18
RRI1YDL216C MPM1P40364 252 aa1.43□□□□□ -2.18
RRI1YDL216C SBH2P52871 88 aa1.43□□□□□ -2.18
RRI1YDL216C GRX3Q03835 250 aa1.43□□□□□ -2.18
RRI1YDL216C YHP1Q04116 353 aa1.43□□□□□ -2.18
RRI1YDL216C FYV12Q08559 129 aa1.43□□□□□ -2.18
RRI1YDL216C YMR030W-AQ3E760 96 aa1.43□□□□□ -2.18
RRI1YDL216C SLH1P53327 1967 aaKnown RBP1.43□□□□□ -2.18
RRI1YDL216C APA2P22108 325 aa1.42□□□□□ -2.18
RRI1YDL216C MAK31P23059 88 aa1.42□□□□□ -2.18
RRI1YDL216C AHT1P29589 182 aa1.42□□□□□ -2.18
RRI1YDL216C YKL102CP34249 101 aa1.42□□□□□ -2.18
RRI1YDL216C NSE4P43124 402 aa1.42□□□□□ -2.18
RRI1YDL216C DML1Q03652 475 aa1.42□□□□□ -2.18
RRI1YDL216C GPI17Q04080 534 aa1.42□□□□□ -2.18
RRI1YDL216C GAL83Q04739 417 aa1.42□□□□□ -2.18
RRI1YDL216C UPS1Q05776 175 aa1.42□□□□□ -2.18
RRI1YDL216C TAR1Q8TGM6 124 aa1.42□□□□□ -2.18
RRI1YDL216C SEC14P24280 304 aaKnown RBP1.41□□□□□ -2.18
RRI1YDL216C RFC2P40348 353 aa1.41□□□□□ -2.18
RRI1YDL216C SNO1Q03144 224 aa1.41□□□□□ -2.18
RRI1YDL216C HPT1Q04178 221 aaKnown RBP1.41□□□□□ -2.18
RRI1YDL216C BRX1Q08235 291 aaKnown RBP1.41□□□□□ -2.18
RRI1YDL216C YBR056W-AI2HB52 66 aa1.4□□□□□ -2.18
RRI1YDL216C RPL43AP0CX25 92 aaKnown RBP1.4□□□□□ -2.18
RRI1YDL216C RPL43BP0CX26 92 aa1.4□□□□□ -2.18
RRI1YDL216C HSP30P25619 332 aa1.4□□□□□ -2.18
RRI1YDL216C ETR1P38071 380 aa1.4□□□□□ -2.18
RRI1YDL216C VPS28Q02767 242 aa1.4□□□□□ -2.18
RRI1YDL216C ATG41Q12048 136 aa1.4□□□□□ -2.18
RRI1YDL216C GCY1P14065 312 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
RRI1YDL216C ATP7P30902 174 aa1.4□□□□□ -2.19
RRI1YDL216C YRA2P36036 203 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
RRI1YDL216C YKR041WP36134 250 aa1.4□□□□□ -2.19
RRI1YDL216C NVJ1P38881 321 aa1.4□□□□□ -2.19
RRI1YDL216C BRR2P32639 2163 aaKnown RBP1.39□□□□□ -2.19
RRI1YDL216C MOB1P40484 314 aa1.39□□□□□ -2.19
RRI1YDL216C GIM3P53900 129 aa1.39□□□□□ -2.19
RRI1YDL216C YPR127WQ06494 345 aa1.39□□□□□ -2.19
RRI1YDL216C YOR381W-AQ3E804 55 aa1.39□□□□□ -2.19
RRI1YDL216C YHL037CP38733 133 aa1.38□□□□□ -2.19
RRI1YDL216C CCS1P40202 249 aaKnown RBP1.38□□□□□ -2.19
RRI1YDL216C HHT1P61830 136 aa1.38□□□□□ -2.19
RRI1YDL216C ELP6Q04868 273 aa1.38□□□□□ -2.19
RRI1YDL216C YOR214CQ12282 236 aa1.38□□□□□ -2.19
RRI1YDL216C CLG1P35190 452 aa1.37□□□□□ -2.19
RRI1YDL216C FYV4P38783 130 aaPredicted RBP1.37□□□□□ -2.19
RRI1YDL216C JAC1P53193 184 aa1.37□□□□□ -2.19
RRI1YDL216C TIM13P53299 105 aa1.37□□□□□ -2.19
RRI1YDL216C YKR005CQ02203 525 aa1.37□□□□□ -2.19
RRI1YDL216C FIT1Q04433 528 aa1.37□□□□□ -2.19
RRI1YDL216C HFA1P32874 2273 aa1.36□□□□□ -2.19
RRI1YDL216C YNL200CP40165 246 aaKnown RBP1.36□□□□□ -2.19
RRI1YDL216C YFL051CP43552 160 aa1.36□□□□□ -2.19
RRI1YDL216C TTI2P47168 421 aa1.36□□□□□ -2.19
RRI1YDL216C TRR1P29509 319 aaKnown RBP1.35□□□□□ -2.19
RRI1YDL216C POG1P40473 351 aa1.35□□□□□ -2.19
RRI1YDL216C RIM9Q04734 239 aa1.35□□□□□ -2.19
RRI1YDL216C UGX2P32772 223 aa1.34□□□□□ -2.2
RRI1YDL216C DCV1P43595 202 aa1.34□□□□□ -2.2
RRI1YDL216C XPT1P47165 209 aa1.34□□□□□ -2.2
RRI1YDL216C POL2P21951 2222 aaKnown RBP1.33□□□□□ -2.2
RRI1YDL216C SEC72P39742 193 aaKnown RBP1.33□□□□□ -2.2
RRI1YDL216C YIL102CP40488 101 aa1.33□□□□□ -2.2
RRI1YDL216C YMR321CQ04898 105 aa1.33□□□□□ -2.2
RRI1YDL216C NUF2P33895 451 aa1.32□□□□□ -2.2
RRI1YDL216C CPR5P35176 225 aa1.32□□□□□ -2.2
RRI1YDL216C RAD6P06104 172 aa1.31□□□□□ -2.2
RRI1YDL216C GLR1P41921 483 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms