RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C DAD3P69850 94 aa3.22□□□□□ -1.89
CDC9YDL164C APS2Q00381 147 aa3.22□□□□□ -1.89
CDC9YDL164C SMD1Q02260 146 aaPredicted RBP3.22□□□□□ -1.89
CDC9YDL164C ANT1Q06497 328 aa3.22□□□□□ -1.89
CDC9YDL164C FSF1Q12029 327 aaKnown RBP3.22□□□□□ -1.89
CDC9YDL164C YNL277W-AQ3E7Z0 62 aa3.22□□□□□ -1.89
CDC9YDL164C STF2P16965 84 aa3.22□□□□□ -1.89
CDC9YDL164C DDR48P18899 430 aaKnown RBP3.22□□□□□ -1.89
CDC9YDL164C GPI2P46961 280 aa3.22□□□□□ -1.89
CDC9YDL164C YMR099CQ03161 297 aaKnown RBP3.22□□□□□ -1.89
CDC9YDL164C AIM36Q03798 255 aa3.22□□□□□ -1.89
CDC9YDL164C ISD11Q6Q560 94 aa3.22□□□□□ -1.89
CDC9YDL164C YCL001W-BQ96VH2 84 aa3.22□□□□□ -1.89
CDC9YDL164C PCL1P24867 279 aa3.21□□□□□ -1.9
CDC9YDL164C ODC2Q99297 307 aa3.21□□□□□ -1.9
CDC9YDL164C YHR032W-AP0C5N6 59 aa3.21□□□□□ -1.9
CDC9YDL164C GPA2P10823 449 aa3.21□□□□□ -1.9
CDC9YDL164C ARO2P28777 376 aaKnown RBP3.21□□□□□ -1.9
CDC9YDL164C MID2P36027 376 aa3.21□□□□□ -1.9
CDC9YDL164C COS8P38723 381 aa3.21□□□□□ -1.9
CDC9YDL164C YAR068WP39564 161 aa3.21□□□□□ -1.9
CDC9YDL164C PIN3Q06449 215 aa3.21□□□□□ -1.9
CDC9YDL164C YEL009C-AA0A023PZF2 135 aa3.2□□□□□ -1.9
CDC9YDL164C POR1P04840 283 aaKnown RBP3.2□□□□□ -1.9
CDC9YDL164C YIL054WP40524 105 aa3.2□□□□□ -1.9
CDC9YDL164C YGL193CP53097 103 aa3.2□□□□□ -1.9
CDC9YDL164C GEP7P53171 287 aa3.2□□□□□ -1.9
CDC9YDL164C EST3Q03096 181 aa3.2□□□□□ -1.9
CDC9YDL164C YER134CP40081 178 aa3.19□□□□□ -1.9
CDC9YDL164C YER188WP40103 239 aa3.19□□□□□ -1.9
CDC9YDL164C HAL1Q01766 294 aa3.19□□□□□ -1.9
CDC9YDL164C TY4B-HP0C2J7 1802 aa3.19□□□□□ -1.9
CDC9YDL164C TY4B-JP47024 1803 aa3.19□□□□□ -1.9
CDC9YDL164C CPA1P07258 411 aaKnown RBP3.19□□□□□ -1.9
CDC9YDL164C HTD2P38790 280 aaKnown RBP3.19□□□□□ -1.9
CDC9YDL164C YFR045WP43617 309 aa3.19□□□□□ -1.9
CDC9YDL164C GON7P46984 123 aa3.19□□□□□ -1.9
CDC9YDL164C RNH202Q05635 350 aa3.19□□□□□ -1.9
CDC9YDL164C PPT2Q12036 173 aa3.19□□□□□ -1.9
CDC9YDL164C YPR063CQ12160 140 aa3.19□□□□□ -1.9
CDC9YDL164C FCY1Q12178 158 aa3.19□□□□□ -1.9
CDC9YDL164C YOL162WP0CF19 215 aa3.18□□□□□ -1.9
CDC9YDL164C PIR5P46999 287 aa3.18□□□□□ -1.9
CDC9YDL164C MRPS16Q02608 121 aa3.18□□□□□ -1.9
CDC9YDL164C CWC27Q02770 301 aa3.18□□□□□ -1.9
CDC9YDL164C HSP12P22943 109 aaKnown RBP3.18□□□□□ -1.9
CDC9YDL164C VMA11P32842 164 aa3.18□□□□□ -1.9
CDC9YDL164C YER135CP40082 130 aa3.18□□□□□ -1.9
CDC9YDL164C BAT2P47176 376 aaKnown RBP3.18□□□□□ -1.9
CDC9YDL164C PAC10P48363 199 aa3.18□□□□□ -1.9
CDC9YDL164C RPS12P48589 143 aaKnown RBP3.18□□□□□ -1.9
CDC9YDL164C RPL22BP56628 122 aaKnown RBP3.18□□□□□ -1.9
CDC9YDL164C YMR252CQ04814 134 aa3.18□□□□□ -1.9
CDC9YDL164C YPR114WQ06107 315 aa3.18□□□□□ -1.9
CDC9YDL164C SYM1Q06563 197 aa3.18□□□□□ -1.9
CDC9YDL164C UBR1P19812 1950 aa3.18□□□□□ -1.9
CDC9YDL164C VAR1P02381 398 aa3.17□□□□□ -1.9
CDC9YDL164C HAP2P06774 265 aa3.17□□□□□ -1.9
CDC9YDL164C NOP1P15646 327 aaKnown RBP3.17□□□□□ -1.9
CDC9YDL164C AHT1P29589 182 aa3.17□□□□□ -1.9
CDC9YDL164C MPM1P40364 252 aa3.17□□□□□ -1.9
CDC9YDL164C SAE3P89114 91 aa3.17□□□□□ -1.9
CDC9YDL164C VPS28Q02767 242 aa3.17□□□□□ -1.9
CDC9YDL164C CBP6P07253 162 aaPredicted RBP3.17□□□□□ -1.9
CDC9YDL164C SPS2P08459 502 aa3.17□□□□□ -1.9
CDC9YDL164C PDX3P38075 228 aaKnown RBP3.17□□□□□ -1.9
CDC9YDL164C ECM31P38122 312 aa3.16□□□□□ -1.9
CDC9YDL164C RRT1P38192 103 aa3.16□□□□□ -1.9
CDC9YDL164C ARC15P40518 154 aaRIP-Chip data3.16□□□□□ -1.9not detected
CDC9YDL164C EAF6P47128 113 aa3.16□□□□□ -1.9
CDC9YDL164C DIE2P50076 525 aa3.16□□□□□ -1.9
CDC9YDL164C AIF1P52923 378 aa3.16□□□□□ -1.9
CDC9YDL164C SBH1P52870 82 aa3.16□□□□□ -1.9
CDC9YDL164C YNR077CP53758 84 aa3.16□□□□□ -1.9
CDC9YDL164C YOR381W-AQ3E804 55 aa3.16□□□□□ -1.9
CDC9YDL164C NSP1P14907 823 aaKnown RBP3.15□□□□□ -1.91
CDC9YDL164C SPC25P40014 221 aa3.15□□□□□ -1.91
CDC9YDL164C GAT4P40569 121 aa3.15□□□□□ -1.91
CDC9YDL164C YGR017WP53210 297 aa3.15□□□□□ -1.91
CDC9YDL164C TIM13P53299 105 aa3.15□□□□□ -1.91
CDC9YDL164C CSI2Q08054 341 aa3.15□□□□□ -1.91
CDC9YDL164C RTR2Q12378 196 aa3.15□□□□□ -1.91
CDC9YDL164C HUT1Q12520 339 aa3.15□□□□□ -1.91
CDC9YDL164C BOL1Q3E793 110 aa3.15□□□□□ -1.91
CDC9YDL164C YAR029WP39549 74 aa3.14□□□□□ -1.91
CDC9YDL164C YER084WP40057 128 aa3.14□□□□□ -1.91
CDC9YDL164C YJL027CP47063 138 aaPredicted RBP3.14□□□□□ -1.91
CDC9YDL164C DOC1P53068 250 aa3.14□□□□□ -1.91
CDC9YDL164C YCR050CP25630 102 aa3.14□□□□□ -1.91
CDC9YDL164C ELC1Q03071 99 aa3.14□□□□□ -1.91
CDC9YDL164C YTH1Q06102 208 aaPredicted RBP3.14□□□□□ -1.91
CDC9YDL164C GTT2Q12390 233 aa3.14□□□□□ -1.91
CDC9YDL164C YGL041W-AP0C5N3 154 aa3.13□□□□□ -1.91
CDC9YDL164C YAL064WP39711 94 aa3.13□□□□□ -1.91
CDC9YDL164C AIM11P87275 137 aa3.13□□□□□ -1.91
CDC9YDL164C FKS3Q04952 1785 aa3.13□□□□□ -1.91
CDC9YDL164C YHR180WP38868 163 aa3.13□□□□□ -1.91
CDC9YDL164C RPB11P38902 120 aa3.13□□□□□ -1.91
CDC9YDL164C MOB1P40484 314 aa3.13□□□□□ -1.91
CDC9YDL164C YMR253CQ04835 414 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms