RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	SMD1	Q02260	146 aa	Predicted RBP	4.69	□□□□□ -1.66
CMR1	YDL156W	YMR295C	Q03559	197 aa		4.69	□□□□□ -1.66
CMR1	YDL156W	RRT7	Q07829	113 aa		4.69	□□□□□ -1.66
CMR1	YDL156W	YSP2	Q06681	1438 aa		4.69	□□□□□ -1.66
CMR1	YDL156W	PDR12	Q02785	1511 aa		4.68	□□□□□ -1.66
CMR1	YDL156W	CDC25	P04821	1589 aa		4.68	□□□□□ -1.66
CMR1	YDL156W	YER135C	P40082	130 aa		4.68	□□□□□ -1.66
CMR1	YDL156W	YNR064C	P53750	290 aa		4.68	□□□□□ -1.66
CMR1	YDL156W	NOP1	P15646	327 aa	Known RBP	4.67	□□□□□ -1.66
CMR1	YDL156W	MPM1	P40364	252 aa		4.67	□□□□□ -1.66
CMR1	YDL156W	SHH3	Q04487	196 aa		4.67	□□□□□ -1.66
CMR1	YDL156W	VTH1	P40438	1549 aa		4.67	□□□□□ -1.66
CMR1	YDL156W	VTH2	P40890	1549 aa		4.67	□□□□□ -1.66
CMR1	YDL156W	TY1B-DR3	Q99231	1755 aa		4.67	□□□□□ -1.66
CMR1	YDL156W	SRL3	P36167	246 aa		4.66	□□□□□ -1.66
CMR1	YDL156W	YBR090C	P38253	122 aa		4.66	□□□□□ -1.66
CMR1	YDL156W	GAT4	P40569	121 aa		4.66	□□□□□ -1.66
CMR1	YDL156W	HYP2	P23301	157 aa	Known RBP	4.65	□□□□□ -1.66
CMR1	YDL156W	RRT1	P38192	103 aa		4.65	□□□□□ -1.66
CMR1	YDL156W	DIE2	P50076	525 aa		4.65	□□□□□ -1.66
CMR1	YDL156W	LIP1	Q03579	150 aa		4.65	□□□□□ -1.66
CMR1	YDL156W	SAS5	Q99314	248 aa		4.65	□□□□□ -1.66
CMR1	YDL156W	RAS2	P01120	322 aa	Known RBP	4.65	□□□□□ -1.67
CMR1	YDL156W	YEL073C	P39974	107 aa		4.65	□□□□□ -1.67
CMR1	YDL156W	MLP1	Q02455	1875 aa	Known RBP	4.65	□□□□□ -1.67
CMR1	YDL156W	YHR032W-A	P0C5N6	59 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	YCR050C	P25630	102 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	SDH4	P37298	181 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	YAR029W	P39549	74 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	YEA6	P39953	335 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	MRPS16	Q02608	121 aa		4.64	□□□□□ -1.67
CMR1	YDL156W	MSW1	P04803	379 aa		4.63	□□□□□ -1.67
CMR1	YDL156W	MDH2	P22133	377 aa		4.63	□□□□□ -1.67
CMR1	YDL156W	GAA1	P39012	614 aa		4.63	□□□□□ -1.67
CMR1	YDL156W	SMD3	P43321	101 aa	Known RBP	4.63	□□□□□ -1.67
CMR1	YDL156W	GNA1	P43577	159 aa	Predicted RBP	4.63	□□□□□ -1.67
CMR1	YDL156W	MPC3	P53311	146 aa		4.63	□□□□□ -1.67
CMR1	YDL156W	UPS1	Q05776	175 aa		4.63	□□□□□ -1.67
CMR1	YDL156W	YOR097C	Q12274	175 aa	Predicted RBP	4.63	□□□□□ -1.67
CMR1	YDL156W	TY2B-LR1	P0C2J3	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-F	P0CX63	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-GR2	P0CX64	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-C	P25384	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-DR2	Q03494	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY1B-DR1	Q03855	1755 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-OR1	Q12113	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-DR1	Q12472	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	TY2B-OR2	Q12501	1770 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	YFR045W	P43617	309 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	ATG10	Q07879	167 aa		4.62	□□□□□ -1.67
CMR1	YDL156W	ADE6	P38972	1358 aa	Known RBP	4.62	□□□□□ -1.67
CMR1	YDL156W	KRE9	P39005	276 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	SAY1	P53324	424 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	GRX5	Q02784	150 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	YMR252C	Q04814	134 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	YOR093C	Q12275	1648 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	RPS19A	P07280	144 aa	Known RBP	4.61	□□□□□ -1.67
CMR1	YDL156W	RPS19B	P07281	144 aa	Predicted RBP	4.61	□□□□□ -1.67
CMR1	YDL156W	YGL041W-A	P0C5N3	154 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	UBC5	P15732	148 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	YNL217W	P40152	326 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	LSM8	P47093	109 aa	Known RBP	4.61	□□□□□ -1.67
CMR1	YDL156W	BAT2	P47176	376 aa	Known RBP	4.61	□□□□□ -1.67
CMR1	YDL156W	YOR268C	Q08734	132 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	YPR063C	Q12160	140 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	SCS22	Q6Q595	175 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	TY2B-B	Q12491	1770 aa		4.61	□□□□□ -1.67
CMR1	YDL156W	DUR1,2	P32528	1835 aa	Known RBP	4.6	□□□□□ -1.67
CMR1	YDL156W	MID2	P36027	376 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	PAM17	P36147	197 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	PAM16	P42949	149 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	MPC1	P53157	130 aa	Known RBP	4.6	□□□□□ -1.67
CMR1	YDL156W	NHP10	Q03435	203 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	UIP4	Q08926	304 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	YOR381W-A	Q3E804	55 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	DOP1	Q03921	1698 aa		4.6	□□□□□ -1.67
CMR1	YDL156W	IML1	P47170	1584 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	YOL162W	P0CF19	215 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	YKR032W	P36127	104 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	FLX1	P40464	311 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	YIR035C	P40579	254 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	DOC1	P53068	250 aa		4.59	□□□□□ -1.67
CMR1	YDL156W	FKS1	P38631	1876 aa	Known RBP	4.59	□□□□□ -1.68
CMR1	YDL156W	TMA19	P35691	167 aa	Known RBP	4.58	□□□□□ -1.68
CMR1	YDL156W	TVP23	P38962	199 aa		4.58	□□□□□ -1.68
CMR1	YDL156W	NSE4	P43124	402 aa		4.58	□□□□□ -1.68
CMR1	YDL156W	RCE1	Q03530	315 aa		4.58	□□□□□ -1.68
CMR1	YDL156W	RIM9	Q04734	239 aa		4.58	□□□□□ -1.68
CMR1	YDL156W	CSI2	Q08054	341 aa		4.58	□□□□□ -1.68
CMR1	YDL156W	FZF1	P32805	299 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	YAL064W	P39711	94 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	ATP19	P81451	68 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	BUD3	P25558	1636 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	YGR164W	P53291	111 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	HAL1	Q01766	294 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	KEI1	Q06346	221 aa		4.57	□□□□□ -1.68
CMR1	YDL156W	YET1	P35723	206 aa		4.56	□□□□□ -1.68
CMR1	YDL156W	THG1	P53215	237 aa	Known RBP	4.56	□□□□□ -1.68
CMR1	YDL156W	YMR103C	Q04436	120 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms