RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	URK1	P27515	501 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	HSP150	P32478	413 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	SRX1	P36077	127 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	PRS4	P38063	326 aa	Predicted RBP	4.63	□□□□□ -1.67
VCX1	YDL128W	YAR068W	P39564	161 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	SHO1	P40073	367 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	BRP1	P53194	125 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	YNR071C	P53757	342 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	POP3	P53833	195 aa	Predicted RBP	4.63	□□□□□ -1.67
VCX1	YDL128W	SWT21	P53873	357 aa	Predicted RBP	4.63	□□□□□ -1.67
VCX1	YDL128W	YNL184C	P53876	108 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	TDA7	P53882	636 aa	Predicted RBP	4.63	□□□□□ -1.67
VCX1	YDL128W	YMR254C	Q04838	102 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	RDL2	Q08742	149 aa	Known RBP	4.63	□□□□□ -1.67
VCX1	YDL128W	YPS3	Q12303	508 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	YBR182C-A	Q8TGU6	64 aa		4.63	□□□□□ -1.67
VCX1	YDL128W	RPS27A	P35997	82 aa	Known RBP	4.62	□□□□□ -1.67
VCX1	YDL128W	MCH2	P36032	473 aa		4.62	□□□□□ -1.67
VCX1	YDL128W	RPS27B	P38711	82 aa		4.62	□□□□□ -1.67
VCX1	YDL128W	YDL180W	Q12301	547 aa		4.62	□□□□□ -1.67
VCX1	YDL128W	PRP46	Q12417	451 aa	Predicted RBP	4.62	□□□□□ -1.67
VCX1	YDL128W	HEM4	P06174	275 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	RPL23A	P0CX41	137 aa	Known RBP	4.61	□□□□□ -1.67
VCX1	YDL128W	RPL23B	P0CX42	137 aa	Known RBP	4.61	□□□□□ -1.67
VCX1	YDL128W	CMC1	P36064	111 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	ECM14	P38836	430 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	YHR173C	P38864	112 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	CRZ1	P53968	678 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	DYN2	Q02647	92 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	SNA4	Q07549	140 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	UTP23	Q12339	254 aa	Known RBP	4.61	□□□□□ -1.67
VCX1	YDL128W	BOL1	Q3E793	110 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	YOS1	Q3E834	85 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	HTL1	Q9URQ5	78 aa		4.61	□□□□□ -1.67
VCX1	YDL128W	CDC43	P18898	376 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	HSP12	P22943	109 aa	Known RBP	4.6	□□□□□ -1.67
VCX1	YDL128W	YIL029C	P40538	142 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	YJL163C	P46996	555 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	LCL3	P53153	274 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	ATG4	P53867	494 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	YML122C	Q03207	126 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	YMR210W	Q03649	449 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	TRS23	Q03784	219 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	ECM18	Q04623	453 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	MPD1	Q12404	318 aa	Known RBP	4.6	□□□□□ -1.67
VCX1	YDL128W	YCR075W-A	Q3E830	75 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	TAO3	P40468	2376 aa		4.6	□□□□□ -1.67
VCX1	YDL128W	YMR316C-A	I2HB70	103 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	RPL7A	P05737	244 aa	Known RBP	4.59	□□□□□ -1.67
VCX1	YDL128W	INO4	P13902	151 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	MDM10	P18409	493 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	ROX3	P25046	220 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	IMP1	P28627	190 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YKL044W	P36092	106 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YPT10	P38146	199 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	ICS2	P38284	255 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	ATX1	P38636	73 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	PAU7	P39545	55 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YER079W	P40052	210 aa	Known RBP	4.59	□□□□□ -1.67
VCX1	YDL128W	UBC13	P52490	153 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YNL092W	P53934	400 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	RAV2	Q03956	351 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YLR296W	Q05898	108 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	PRM3	Q08931	133 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	AYT1	Q12226	474 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YKL023C-A	Q2V2P3	75 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	YGL258W-A	Q3E740	77 aa		4.59	□□□□□ -1.67
VCX1	YDL128W	CYC3	P06182	269 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	MRS3	P10566	314 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	TOM40	P23644	387 aa	Known RBP	4.58	□□□□□ -1.68
VCX1	YDL128W	APS1	P35181	156 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	YPI1	P43587	155 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	YPL080C	Q02826	108 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	UPS1	Q05776	175 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	YDL218W	Q07629	317 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	TIM18	Q08749	192 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	BLM10	P43583	2143 aa		4.58	□□□□□ -1.68
VCX1	YDL128W	VPS63	O13549	108 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	DIF1	O13577	133 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	MRPL31	P14063	131 aa	Predicted RBP	4.57	□□□□□ -1.68
VCX1	YDL128W	YMR31	P19955	123 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	MST28	P39552	234 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	PCP1	P53259	346 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	YHP1	Q04116	353 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	FIT2	Q08906	153 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	GRE1	Q08969	168 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	FOL3	Q12676	427 aa	Predicted RBP	4.57	□□□□□ -1.68
VCX1	YDL128W	ISD11	Q6Q560	94 aa		4.57	□□□□□ -1.68
VCX1	YDL128W	RPS16A	P0CX51	143 aa	Known RBP	4.56	□□□□□ -1.68
VCX1	YDL128W	RPS16B	P0CX52	143 aa	Known RBP	4.56	□□□□□ -1.68
VCX1	YDL128W	RML2	P32611	393 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	FZF1	P32805	299 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	OST1	P41543	476 aa	Known RBP	4.56	□□□□□ -1.68
VCX1	YDL128W	YFL065C	P43539	102 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	OST2	P46964	130 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	IRC25	Q07951	179 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	GEP3	Q08622	556 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	YPR203W	Q08994	102 aa		4.56	□□□□□ -1.68
VCX1	YDL128W	VAR1	P02381	398 aa		4.55	□□□□□ -1.68
VCX1	YDL128W	RPL27B	P0C2H7	136 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms