RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W PNC1P53184 216 aaKnown RBP3.3□□□□□ -1.88
RER1YCL001W ACT1P60010 375 aaKnown RBP3.3□□□□□ -1.88
RER1YCL001W YMR082CQ04276 118 aa3.3□□□□□ -1.88
RER1YCL001W RRT7Q07829 113 aa3.3□□□□□ -1.88
RER1YCL001W YHR213W-AQ8TGT4 77 aa3.3□□□□□ -1.88
RER1YCL001W FCY2P17064 533 aa3.29□□□□□ -1.88
RER1YCL001W ACB1P31787 87 aa3.29□□□□□ -1.88
RER1YCL001W TIR2P33890 251 aa3.29□□□□□ -1.88
RER1YCL001W MRPL49P40858 161 aaPredicted RBP3.29□□□□□ -1.88
RER1YCL001W YJL027CP47063 138 aaPredicted RBP3.29□□□□□ -1.88
RER1YCL001W YDR274CP87283 123 aa3.29□□□□□ -1.88
RER1YCL001W ATG39Q06159 398 aa3.29□□□□□ -1.88
RER1YCL001W POC4Q12245 148 aaPredicted RBP3.29□□□□□ -1.88
RER1YCL001W YLR146W-AQ2V2P1 62 aa3.29□□□□□ -1.88
RER1YCL001W YCR025CP25352 136 aa3.28□□□□□ -1.88
RER1YCL001W AUA1P32450 94 aa3.28□□□□□ -1.88
RER1YCL001W YEA4P40004 342 aa3.28□□□□□ -1.88
RER1YCL001W YGR269WP40326 108 aa3.28□□□□□ -1.88
RER1YCL001W SWM2P40342 146 aa3.28□□□□□ -1.88
RER1YCL001W IMP2P46972 177 aa3.28□□□□□ -1.88
RER1YCL001W BNS1P50084 137 aa3.28□□□□□ -1.88
RER1YCL001W GRH1Q04410 372 aaKnown RBP3.28□□□□□ -1.88
RER1YCL001W YLR179CQ06252 201 aaKnown RBP3.28□□□□□ -1.88
RER1YCL001W YPR013CQ12145 317 aa3.28□□□□□ -1.88
RER1YCL001W PRR2Q12310 699 aa3.28□□□□□ -1.88
RER1YCL001W PAA1Q12447 191 aaKnown RBP3.28□□□□□ -1.88
RER1YCL001W MDN1Q12019 4910 aaKnown RBP3.27□□□□□ -1.89
RER1YCL001W RPS25BP0C0T4 108 aaKnown RBP3.27□□□□□ -1.89
RER1YCL001W YHR213WP0CI67 198 aa3.27□□□□□ -1.89
RER1YCL001W SAR1P20606 190 aaKnown RBP3.27□□□□□ -1.89
RER1YCL001W ECM33P38248 429 aaKnown RBP3.27□□□□□ -1.89
RER1YCL001W MIG3P39943 394 aa3.27□□□□□ -1.89
RER1YCL001W GLE2P40066 365 aa3.27□□□□□ -1.89
RER1YCL001W AGX1P43567 385 aa3.27□□□□□ -1.89
RER1YCL001W CAX4P53223 239 aa3.27□□□□□ -1.89
RER1YCL001W LST7P53237 242 aa3.27□□□□□ -1.89
RER1YCL001W SDH7Q04401 133 aa3.27□□□□□ -1.89
RER1YCL001W RPS25AQ3E792 108 aaPredicted RBP3.27□□□□□ -1.89
RER1YCL001W TAR1Q8TGM6 124 aa3.27□□□□□ -1.89
RER1YCL001W CDC7P06243 507 aa3.26□□□□□ -1.89
RER1YCL001W UPS2P35200 230 aa3.26□□□□□ -1.89
RER1YCL001W SNF11P38956 169 aa3.26□□□□□ -1.89
RER1YCL001W YJR015WP47090 510 aa3.26□□□□□ -1.89
RER1YCL001W TDA4P47153 279 aa3.26□□□□□ -1.89
RER1YCL001W MIC27P50945 234 aa3.26□□□□□ -1.89
RER1YCL001W HST4P53688 370 aa3.26□□□□□ -1.89
RER1YCL001W ERV25P54837 211 aaKnown RBP3.26□□□□□ -1.89
RER1YCL001W DID2P69771 204 aa3.26□□□□□ -1.89
RER1YCL001W BER1Q06688 274 aaKnown RBP3.26□□□□□ -1.89
RER1YCL001W AGC1Q12482 902 aa3.26□□□□□ -1.89
RER1YCL001W EMP24P32803 203 aaKnown RBP3.25□□□□□ -1.89
RER1YCL001W SHB17P36136 271 aaKnown RBP3.25□□□□□ -1.89
RER1YCL001W OXA1P39952 402 aa3.25□□□□□ -1.89
RER1YCL001W YER137CP40083 148 aaKnown RBP3.25□□□□□ -1.89
RER1YCL001W YJR111CP47148 283 aaKnown RBP3.25□□□□□ -1.89
RER1YCL001W ALG13P53178 202 aa3.25□□□□□ -1.89
RER1YCL001W FYV6P53913 173 aa3.25□□□□□ -1.89
RER1YCL001W RRG8Q06109 277 aa3.25□□□□□ -1.89
RER1YCL001W ANT1Q06497 328 aa3.25□□□□□ -1.89
RER1YCL001W QCR9P22289 66 aa3.24□□□□□ -1.89
RER1YCL001W AHT1P29589 182 aa3.24□□□□□ -1.89
RER1YCL001W ACP1P32463 125 aa3.24□□□□□ -1.89
RER1YCL001W ASP1P38986 381 aaPredicted RBP3.24□□□□□ -1.89
RER1YCL001W TAD2P47058 250 aa3.24□□□□□ -1.89
RER1YCL001W MIC26P50087 233 aa3.24□□□□□ -1.89
RER1YCL001W YNR066CP53752 436 aa3.24□□□□□ -1.89
RER1YCL001W SHH3Q04487 196 aa3.24□□□□□ -1.89
RER1YCL001W MSC3Q05812 728 aa3.24□□□□□ -1.89
RER1YCL001W YMR316C-AI2HB70 103 aa3.23□□□□□ -1.89
RER1YCL001W DDI2P0CH63 225 aa3.23□□□□□ -1.89
RER1YCL001W DDI3P0CH64 225 aa3.23□□□□□ -1.89
RER1YCL001W GCN3P14741 305 aa3.23□□□□□ -1.89
RER1YCL001W MSK1P32048 576 aa3.23□□□□□ -1.89
RER1YCL001W SRL3P36167 246 aa3.23□□□□□ -1.89
RER1YCL001W SFT2P38166 215 aa3.23□□□□□ -1.89
RER1YCL001W PET100P38958 111 aa3.23□□□□□ -1.89
RER1YCL001W GCV3P39726 170 aaPredicted RBP3.23□□□□□ -1.89
RER1YCL001W SNU13P39990 126 aaKnown RBP3.23□□□□□ -1.89
RER1YCL001W GPI2P46961 280 aa3.23□□□□□ -1.89
RER1YCL001W YNL146C-AQ3E7Z1 64 aa3.23□□□□□ -1.89
RER1YCL001W UBI4P0CG63 381 aaKnown RBP3.22□□□□□ -1.89
RER1YCL001W MAG1P22134 296 aaKnown RBP3.22□□□□□ -1.89
RER1YCL001W YBR292CP38357 123 aa3.22□□□□□ -1.89
RER1YCL001W RIB4P50861 169 aaPredicted RBP3.22□□□□□ -1.89
RER1YCL001W YIP3P53633 176 aa3.22□□□□□ -1.89
RER1YCL001W UBC7Q02159 165 aa3.22□□□□□ -1.89
RER1YCL001W MRPS17Q03246 237 aaPredicted RBP3.22□□□□□ -1.89
RER1YCL001W AVO2Q04749 426 aa3.22□□□□□ -1.89
RER1YCL001W YPL162CQ12042 273 aa3.22□□□□□ -1.89
RER1YCL001W YPR063CQ12160 140 aa3.22□□□□□ -1.89
RER1YCL001W CDC50P25656 391 aa3.21□□□□□ -1.9
RER1YCL001W YRA2P36036 203 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
RER1YCL001W LSM2P38203 95 aaKnown RBP3.21□□□□□ -1.9
RER1YCL001W DER1P38307 211 aa3.21□□□□□ -1.9
RER1YCL001W MRPL50P53724 139 aa3.21□□□□□ -1.9
RER1YCL001W COX12Q01519 83 aa3.21□□□□□ -1.9
RER1YCL001W YMR007WQ03675 126 aa3.21□□□□□ -1.9
RER1YCL001W CTR3Q06686 241 aa3.21□□□□□ -1.9
RER1YCL001W YOL160WQ08321 113 aa3.21□□□□□ -1.9
RER1YCL001W FCF2Q12035 217 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms