RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W RCF2P53721 224 aa1.63□□□□□ -2.15
DPB3YBR278W FMN1Q03778 218 aa1.63□□□□□ -2.15
DPB3YBR278W NMA1Q06178 401 aaKnown RBP1.63□□□□□ -2.15
DPB3YBR278W SCS22Q6Q595 175 aa1.63□□□□□ -2.15
DPB3YBR278W YHR212W-AP0CX91 67 aa1.62□□□□□ -2.15
DPB3YBR278W ATP19P81451 68 aa1.62□□□□□ -2.15
DPB3YBR278W CSN9Q03981 162 aa1.62□□□□□ -2.15
DPB3YBR278W KEI1Q06346 221 aa1.62□□□□□ -2.15
DPB3YBR278W IRC19Q07843 230 aa1.62□□□□□ -2.15
DPB3YBR278W RIB3Q99258 208 aa1.62□□□□□ -2.15
DPB3YBR278W YGL041W-AP0C5N3 154 aa1.61□□□□□ -2.15
DPB3YBR278W YBR242WP38331 238 aa1.61□□□□□ -2.15
DPB3YBR278W PHB1P40961 287 aa1.61□□□□□ -2.15
DPB3YBR278W GLC8P41818 229 aa1.61□□□□□ -2.15
DPB3YBR278W YGR039WP53225 103 aa1.61□□□□□ -2.15
DPB3YBR278W YGR042WP53227 271 aa1.61□□□□□ -2.15
DPB3YBR278W CMC4Q3E7A9 73 aa1.61□□□□□ -2.15
DPB3YBR278W SHB17P36136 271 aaKnown RBP1.6□□□□□ -2.15
DPB3YBR278W YEL014CP39999 101 aa1.6□□□□□ -2.15
DPB3YBR278W YGL230CP53074 147 aa1.6□□□□□ -2.15
DPB3YBR278W YGL204CP53089 101 aa1.6□□□□□ -2.15
DPB3YBR278W SPC2Q04969 178 aa1.6□□□□□ -2.15
DPB3YBR278W SPC3Q12133 184 aa1.6□□□□□ -2.15
DPB3YBR278W VAR1P02381 398 aa1.59□□□□□ -2.15
DPB3YBR278W MRPL15P36523 253 aa1.59□□□□□ -2.15
DPB3YBR278W YHR140WP38842 239 aa1.59□□□□□ -2.15
DPB3YBR278W GIM4P40005 111 aaKnown RBP1.59□□□□□ -2.15
DPB3YBR278W CYR1P08678 2026 aaKnown RBP1.58□□□□□ -2.16
DPB3YBR278W COX5BP00425 151 aa1.58□□□□□ -2.16
DPB3YBR278W KIN28P06242 306 aa1.58□□□□□ -2.16
DPB3YBR278W POP7P38291 140 aa1.58□□□□□ -2.16
DPB3YBR278W APS3P47064 194 aa1.58□□□□□ -2.16
DPB3YBR278W UBR2Q07963 1872 aa1.58□□□□□ -2.16
DPB3YBR278W HSP150P32478 413 aa1.57□□□□□ -2.16
DPB3YBR278W RPL14AP36105 138 aaKnown RBP1.57□□□□□ -2.16
DPB3YBR278W ECM31P38122 312 aa1.57□□□□□ -2.16
DPB3YBR278W RPL14BP38754 138 aaKnown RBP1.57□□□□□ -2.16
DPB3YBR278W IPT1P38954 527 aa1.57□□□□□ -2.16
DPB3YBR278W FIT1Q04433 528 aa1.57□□□□□ -2.16
DPB3YBR278W YPR153WQ06537 140 aa1.57□□□□□ -2.16
DPB3YBR278W YPR203WQ08994 102 aa1.57□□□□□ -2.16
DPB3YBR278W PRE1P22141 198 aaKnown RBP1.56□□□□□ -2.16
DPB3YBR278W SUA7P29055 345 aaPredicted RBP1.56□□□□□ -2.16
DPB3YBR278W TRS20P38334 175 aa1.56□□□□□ -2.16
DPB3YBR278W YNL019CP53975 284 aa1.56□□□□□ -2.16
DPB3YBR278W YLR361C-AQ3E795 98 aa1.56□□□□□ -2.16
DPB3YBR278W BEM2P39960 2167 aaKnown RBP1.55□□□□□ -2.16
DPB3YBR278W RPS1BP23248 255 aaKnown RBP1.55□□□□□ -2.16
DPB3YBR278W FYV5P25585 152 aa1.55□□□□□ -2.16
DPB3YBR278W YKR070WP36151 352 aaKnown RBP1.55□□□□□ -2.16
DPB3YBR278W PRS3P38689 320 aaKnown RBP1.54□□□□□ -2.16
DPB3YBR278W HPM1P40481 377 aa1.54□□□□□ -2.16
DPB3YBR278W YFL051CP43552 160 aa1.54□□□□□ -2.16
DPB3YBR278W LSM8P47093 109 aaKnown RBP1.54□□□□□ -2.16
DPB3YBR278W VMA10P48836 114 aaKnown RBP1.54□□□□□ -2.16
DPB3YBR278W SPG1P50088 95 aa1.54□□□□□ -2.16
DPB3YBR278W EMC4P53073 190 aa1.54□□□□□ -2.16
DPB3YBR278W TIM8P57744 87 aa1.54□□□□□ -2.16
DPB3YBR278W YCL001W-AP87012 153 aa1.54□□□□□ -2.16
DPB3YBR278W ATP14Q12349 124 aa1.54□□□□□ -2.16
DPB3YBR278W HUT1Q12520 339 aa1.54□□□□□ -2.16
DPB3YBR278W FMP49A0A023PZB3 126 aa1.53□□□□□ -2.16
DPB3YBR278W NHP6AP11632 93 aaKnown RBP1.53□□□□□ -2.16
DPB3YBR278W HYM1P32464 399 aa1.53□□□□□ -2.16
DPB3YBR278W DIE2P50076 525 aa1.53□□□□□ -2.16
DPB3YBR278W ELC1Q03071 99 aa1.53□□□□□ -2.16
DPB3YBR278W SOM1Q05676 74 aa1.53□□□□□ -2.16
DPB3YBR278W GPI11Q06636 219 aa1.53□□□□□ -2.16
DPB3YBR278W VAM10Q08474 114 aa1.53□□□□□ -2.16
DPB3YBR278W FCY1Q12178 158 aa1.53□□□□□ -2.16
DPB3YBR278W MON2P48563 1636 aaPredicted RBP1.52□□□□□ -2.17
DPB3YBR278W HYP2P23301 157 aaKnown RBP1.52□□□□□ -2.17
DPB3YBR278W YHL037CP38733 133 aa1.52□□□□□ -2.17
DPB3YBR278W YGR017WP53210 297 aa1.52□□□□□ -2.17
DPB3YBR278W DYN2Q02647 92 aa1.52□□□□□ -2.17
DPB3YBR278W TMA23Q03525 211 aa1.52□□□□□ -2.17
DPB3YBR278W YOR385WQ08909 290 aa1.52□□□□□ -2.17
DPB3YBR278W DDP1Q99321 188 aaKnown RBP1.52□□□□□ -2.17
DPB3YBR278W RPS20P38701 121 aaKnown RBP1.51□□□□□ -2.17
DPB3YBR278W CNL1Q06333 122 aa1.51□□□□□ -2.17
DPB3YBR278W RAF1Q06891 181 aa1.51□□□□□ -2.17
DPB3YBR278W YCR050CP25630 102 aa1.5□□□□□ -2.17
DPB3YBR278W RPS1AP33442 255 aaKnown RBP1.5□□□□□ -2.17
DPB3YBR278W ATG8P38182 117 aaRIP-Chip data1.5□□□□□ -2.17not detected
DPB3YBR278W YBR027CP38220 110 aa1.5□□□□□ -2.17
DPB3YBR278W DCV1P43595 202 aa1.5□□□□□ -2.17
DPB3YBR278W YDR278CQ05612 105 aa1.5□□□□□ -2.17
DPB3YBR278W YNL277W-AQ3E7Z0 62 aa1.5□□□□□ -2.17
DPB3YBR278W HSL1P34244 1518 aa1.5□□□□□ -2.17
DPB3YBR278W YAL064WP39711 94 aa1.49□□□□□ -2.17
DPB3YBR278W YMR007WQ03675 126 aa1.48□□□□□ -2.17
DPB3YBR278W TVP18Q04767 167 aa1.48□□□□□ -2.17
DPB3YBR278W MHF1Q3E835 90 aa1.48□□□□□ -2.17
DPB3YBR278W UBR1P19812 1950 aa1.48□□□□□ -2.17
DPB3YBR278W ACC1Q00955 2233 aaKnown RBP1.47□□□□□ -2.17
DPB3YBR278W RPL33AP05744 107 aaKnown RBP1.47□□□□□ -2.17
DPB3YBR278W SED1Q01589 338 aa1.47□□□□□ -2.17
DPB3YBR278W SEN15Q04675 128 aa1.47□□□□□ -2.17
DPB3YBR278W NAT5Q08689 176 aa1.47□□□□□ -2.17
DPB3YBR278W Q0144Q9ZZW2 109 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms