RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CRTC3Q6UUV7 619 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 R3HCC1LQ7Z5L2 792 aaKnown RBP8.03□□□□□ -1.12
NECAP1-220ENST00000639841 CTU1Q7Z7A3 348 aaKnown RBP8.03□□□□□ -1.12
NECAP1-220ENST00000639841 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-220ENST00000639841 THAP4Q8WY91 577 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 ASPNQ9BXN1 380 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 ITPAQ9BY32 194 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 ACE2Q9BYF1 805 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-220ENST00000639841 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 POFUT1Q9H488 388 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 EPS8L2Q9H6S3 715 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 PAPPA2Q9BXP8 1791 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 ABCC4O15439 1325 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 SH3TC1Q8TE82 1336 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 HMX3A6NHT5 357 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 LINC01387J3KSC0 135 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 AP3D1O14617 1153 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 ASNA1O43681 348 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-220ENST00000639841 ARL4DP49703 201 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 RCAN1P53805 252 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 EIF4A1P60842 406 aaKnown RBP8.02□□□□□ -1.12
NECAP1-220ENST00000639841 MALLQ13021 153 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 PPA1Q15181 289 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 EPHA7Q15375 998 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 AOC3Q16853 763 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 SUSD4Q5VX71 490 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 ABRAXAS1Q6UWZ7 409 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 BBS12Q6ZW61 710 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 SYT9Q86SS6 491 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 CCDC170Q8IYT3 715 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 GLIS1Q8NBF1 620 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 KCTD6Q8NC69 237 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 Q8NFD4 153 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 OR2I1PQ8NGU4 316 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 IQCDQ96DY2 449 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-220ENST00000639841 KLHDC7BQ96G42 594 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.12
NECAP1-220ENST00000639841 GBA2Q9HCG7 927 aaPredicted RBP8.02□□□□□ -1.12
NECAP1-220ENST00000639841 DLG5Q8TDM6 1919 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 UBN2Q6ZU65 1347 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 H3BUI4 141 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 SLC16A6O15403 523 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 COBLO75128 1261 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 PRAMEF1O95521 474 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 HOXB7P09629 217 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 MYL4P12829 197 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 P4HA1P13674 534 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 ABCD3P28288 659 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 ATP5DP30049 168 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 DPP6P42658 865 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 NLRP5P59047 1200 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 RPS16P62249 146 aaKnown RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 CALD1Q05682 793 aaKnown RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 FOXC1Q12948 553 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 TRIM29Q14134 588 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 TTLL4Q14679 1199 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 PRPF39Q86UA1 669 aaKnown RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 RNF141Q8WVD5 230 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 WNT8BQ93098 351 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 HDAC10Q969S8 669 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 NUCKS1Q9H1E3 243 aaKnown RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 CNOT7Q9UIV1 285 aaKnown RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 MTF2Q9Y483 593 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-220ENST00000639841 PCDHA13Q9Y5I0 950 aa8.02□□□□□ -1.13
NECAP1-220ENST00000639841 SYNGAP1Q96PV0 1343 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 NT5C1B-RDH14C9J2C7 533 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 SIGLEC6O43699 453 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 ACADMP11310 421 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 SCG2P13521 617 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 PPP5CP53041 499 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 NFRKBQ6P4R8 1299 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 Q6ZNB5 142 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 ESPNLQ6ZVH7 1005 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 BEND5Q7L4P6 421 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 NUP93Q8N1F7 819 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 RUFY2Q8WXA3 655 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 ISL2Q96A47 359 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 RBM18Q96H35 190 aaKnown RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 ZNF845Q96IR2 970 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 PPP1R9BQ96SB3 815 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 GLIS2Q9BZE0 524 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 CHST7Q9NS84 486 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 AFF4Q9UHB7 1163 aaKnown RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 KIAA0355O15063 1070 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 NKRFO15226 690 aaKnown RBP eCLIP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 SCGB1D1O95968 90 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 SMPD1P17405 629 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 HDCP19113 662 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-220ENST00000639841 PPP2R1AP30153 589 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 HADHAP40939 763 aa8.01□□□□□ -1.13
NECAP1-220ENST00000639841 FLYWCH1Q4VC44 716 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms