RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SYDE2Q5VT97 1194 aa20.08■□□□□ 0.81
CACNA1A-257ENST00000638009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.08■□□□□ 0.81
CACNA1A-257ENST00000638009 RDM1Q8NG50 284 aa20.08■□□□□ 0.81
CACNA1A-257ENST00000638009 RNPC3Q96LT9 517 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-257ENST00000638009 FAM92AA1XBS5 289 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 SCARA3Q6AZY7 606 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 RAD18Q9NS91 495 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 SIK3Q9Y2K2 1263 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 AP3M1Q9Y2T2 418 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 TCF4P15884 667 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 CRKP46108 304 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 CYFIP1Q7L576 1253 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 MAPRE3Q9UPY8 281 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 PTPN1P18031 435 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 IREB2P48200 963 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 NUDT2P50583 147 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 EFHD2Q96C19 240 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 NAT9Q9BTE0 207 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 KLHL11Q9NVR0 708 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 MYOM2P54296 1465 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 ASB14A6NK59 587 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 CSNK2BP67870 215 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 CAMK1Q14012 370 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 DAPK2Q9UIK4 370 aa20.08■□□□□ 0.8
CACNA1A-257ENST00000638009 SNUPNO95149 360 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 THRAP10827 490 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 FOSL2P15408 326 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 GRK4P32298 578 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 VAMP7P51809 220 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 TWF1Q12792 350 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 PDK1Q15118 436 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 CLYBLQ8N0X4 340 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 TBC1D22BQ9NU19 505 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 USP19O94966 1318 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 VWA5AO00534 786 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 PTGES3Q15185 160 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 COMMD2Q86X83 199 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 IP6K1Q92551 441 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 CNKSR1Q969H4 720 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 PAK5Q9P286 719 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 CALB2P22676 271 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 TUBA4AP68366 448 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 TRPV3Q8NET8 790 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 WBP11Q9Y2W2 641 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 XDHP47989 1333 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 HEATR9A2RTY3 570 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 GSAPA4D1B5 854 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 ATP5BP06576 529 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 CHN1P15882 459 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 RBM15Q96T37 977 aaKnown RBP eCLIP20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 CHCHD6Q9BRQ6 235 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 NRDE2Q9H7Z3 1164 aa20.07■□□□□ 0.8
CACNA1A-257ENST00000638009 SLC26A4O43511 780 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 OSTNP61366 133 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 KCNH2Q12809 1159 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 GNA13Q14344 377 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 UBN2Q6ZU65 1347 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 CYP27A1Q02318 531 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 EFR3AQ14156 821 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 MIEF2Q96C03 454 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 M0QYV0 167 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 PTK7Q13308 1070 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 SLC27A3Q5K4L6 730 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 PIK3C3Q8NEB9 887 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 CRELD1Q96HD1 420 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 LEMD3Q9Y2U8 911 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 FTLP02792 175 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 CNTFP26441 200 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 TRAF3Q13114 568 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 HEMGNQ9BXL5 484 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 CYP2D6P10635 497 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 USP10Q14694 798 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 HPS3Q969F9 1004 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 PHF11Q9UIL8 331 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 WDR41Q9HAD4 459 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 POTEMA6NI47 508 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 F8VZ95 297 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 APOC1P02654 83 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 UBTFL6P0CB48 400 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 C21orf59P57076 290 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 IRAK1BP1Q5VVH5 260 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 POTEHQ6S545 545 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 POTEGQ6S5H5 508 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 SDR42E1Q8WUS8 393 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 PI4KBQ9UBF8 816 aa20.06■□□□□ 0.8
CACNA1A-257ENST00000638009 DDX53Q86TM3 631 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CHSY1Q86X52 802 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 FRMD8P1Q9BZ68 369 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 COPS7BQ9H9Q2 264 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ADCY6O43306 1168 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SEC24BO95487 1268 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 B2RBV5 119 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms