RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 C1QTNF9P0C862 333 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 MAPTP10636 758 aaKnown RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 HOXA6P31267 233 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 DDIT3P35638 169 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 CDR1P51861 262 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 NCKAP1LP55160 1127 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 YWHAHQ04917 246 aaPredicted RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 SPAG1Q07617 926 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 FCHO2Q0JRZ9 810 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 PLD1Q13393 1074 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 CCINQ13939 588 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 ARHGAP29Q52LW3 1261 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 SEZ6Q53EL9 994 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 HSP90B2PQ58FF3 399 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 RNF43Q68DV7 783 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 TCEAL6Q6IPX3 200 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 KCNK18Q7Z418 384 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 CD302Q8IX05 232 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 GAB3Q8WWW8 586 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 TCEAL3Q969E4 200 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 LOXL4Q96JB6 756 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 ZBTB45Q96K62 511 aaPredicted RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 PNMA5Q96PV4 448 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 RUSC1Q9BVN2 902 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 LSM14BQ9BX40 385 aaKnown RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 LRRC3Q9BY71 257 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 CCSER1Q9C0I3 900 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 SMG9Q9H0W8 520 aaKnown RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 ANKFY1Q9P2R3 1169 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 SLC8A2Q9UPR5 921 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 PP2D1A8MPX8 630 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 GIPC1O14908 333 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 XPOTO43592 962 aaKnown RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 PRAMEF12O95522 483 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 CLTAP09496 248 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 SPINK2P20155 84 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 GABRR2P28476 465 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 CDC25AP30304 524 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 MPLP40238 635 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 RAP1GAPP47736 663 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 CYP4F8P98187 520 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 FOXC1Q12948 553 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 NOLC1Q14978 699 aaKnown RBP eCLIP9.23□□□□□ -0.93
GPC6-202ENST00000617456 ARHGAP15Q53QZ3 475 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 DSTYKQ6XUX3 929 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 GAREM2Q75VX8 874 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 USP37Q86T82 979 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 SYNPOQ8N3V7 929 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 ATAD1Q8NBU5 361 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 TMEM209Q96SK2 561 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 TACO1Q9BSH4 297 aaKnown RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 MKNK1Q9BUB5 465 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 PARVGQ9HBI0 331 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 ANKRD11Q6UB99 2663 aaPredicted RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 PDCD11Q14690 1871 aaKnown RBP9.23□□□□□ -0.93
GPC6-202ENST00000617456 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
GPC6-202ENST00000617456 MTMR11A4FU01 709 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 DCLK1O15075 740 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SLC16A4O15374 487 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 OAZ2O95190 189 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 CXCL8P10145 99 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 LRPAP1P30533 357 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 MATR3P43243 847 aaKnown RBP eCLIP9.22□□□□□ -0.93
GPC6-202ENST00000617456 MAGEA8P43361 318 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 NOVA1P51513 510 aaKnown RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 GUCY2FP51841 1108 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 GTF2BQ00403 316 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 CREB5Q02930 508 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 CCDC173Q0VFZ6 552 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 GRSF1Q12849 480 aaKnown RBP eCLIP9.22□□□□□ -0.93
GPC6-202ENST00000617456 ZBTB6Q15916 424 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 SLC10A6Q3KNW5 377 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 PLK5Q496M5 336 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 PLA2G2CQ5R387 149 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 CENPPQ6IPU0 288 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 FSTL4Q6MZW2 842 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 UNQ6494/PRO21346Q6UXR6 183 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 ZNF771Q7L3S4 317 aaPredicted RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 DNAJB7Q7Z6W7 309 aaPredicted RBP9.22□□□□□ -0.93
GPC6-202ENST00000617456 PDCL2Q8N4E4 241 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 MYRIPQ8NFW9 859 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 BPIFB1Q8TDL5 484 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 PSMG2Q969U7 264 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 HVCN1Q96D96 273 aa9.22□□□□□ -0.93
GPC6-202ENST00000617456 KIF12Q96FN5 646 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms