RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SHBGP04278 402 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 XPAP23025 273 aaPredicted RBP11.39□□□□□ -0.59
FAM3A-221ENST00000612856 ARL4AP40617 200 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 MLH1P40692 756 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 SERPINB4P48594 390 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 DEUP1Q05D60 604 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 CFAP157Q5JU67 520 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 HHATQ5VTY9 493 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 SYCE1Q8N0S2 351 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 NAGPAQ9UK23 515 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 A0A1B0GUL6 1792 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 GAS8O95995 478 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
FAM3A-221ENST00000612856 TNFSF9P41273 254 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 TRIM32Q13049 653 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 Q4G0T1 1027 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 TAOK1Q7L7X3 1001 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 TSNARE1Q96NA8 513 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 DPP3Q9NY33 737 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 CNTNAP1P78357 1384 aa11.39□□□□□ -0.59
FAM3A-221ENST00000612856 PRR23AA6NEV1 266 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SLC15A5A6NIM6 579 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CA12O43570 354 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SDC4P31431 198 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 FKBP1BP68106 108 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 KLC1Q07866 573 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF844Q08AG5 666 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ORC2Q13416 577 aaPredicted RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 DCAF6Q58WW2 860 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 GPAT2Q6NUI2 795 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 VPS52Q8N1B4 723 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SLC5A5Q92911 643 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CAVIN3Q969G5 261 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 GCNAQ96QF7 691 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CNOT10Q9H9A5 744 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SMYD2Q9NRG4 433 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 LAMB2P55268 1798 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 PGRMC1O00264 195 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 RECQL4O94761 1208 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ARIH2O95376 493 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 FGGP02679 453 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 LBX1P52954 281 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 OAZ1P54368 228 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 TMED1Q13445 227 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 BTBD8Q5XKL5 378 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SNRNP27Q8WVK2 155 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 RAB3IPQ96QF0 476 aaPredicted RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 NUP85Q9BW27 656 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SCN7AQ01118 1682 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 TIAM2Q8IVF5 1701 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 DPPA5A6NC42 116 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 KLHL33A6NCF5 533 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 THP07101 528 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ZCCHC18P0CG32 403 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SMPD1P17405 629 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 SEPT6Q14141 434 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF484Q5JVG2 852 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 EMC1Q8N766 993 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 PGBD4Q96DM1 585 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 STMN4Q9H169 189 aaPredicted RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 CHCHD3Q9NX63 227 aaKnown RBP11.38□□□□□ -0.59
FAM3A-221ENST00000612856 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 WNK3Q9BYP7 1800 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 MYH1P12882 1939 aa11.38□□□□□ -0.59
FAM3A-221ENST00000612856 GPR182O15218 404 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ASAP2O43150 1006 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 EDIL3O43854 480 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF862O60290 1169 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 KRT15P19012 456 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 DLG4P78352 724 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 DARS2Q6PI48 645 aaKnown RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 C1orf131Q8NDD1 294 aaKnown RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 NPLOC4Q8TAT6 608 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 USP33Q8TEY7 942 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 CYTH2Q99418 400 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 CCDC77Q9BR77 488 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ENTPD7Q9NQZ7 604 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 APEX2Q9UBZ4 518 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 TELO2Q9Y4R8 837 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 A0A0G2JLL6 359 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 TYW5A2RUC4 315 aaKnown RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 GJB6O95452 261 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 PDGFRAP16234 1089 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 GLRA2P23416 452 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 VEGFBP49765 207 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms