RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 P4HA1P13674 534 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
CALM3-212ENST00000599839 ZNF18P17022 549 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 ATF6P18850 670 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 EEF1GP26641 437 aaKnown RBP16.8■□□□□ 0.28
CALM3-212ENST00000599839 PCSK1P29120 753 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 GPR15P49685 360 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 NDST1P52848 882 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 KRT31Q15323 416 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 VWA3BQ502W6 1294 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 CRACR2AQ9BSW2 395 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 PRKD2Q9BZL6 878 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 INTS2Q9H0H0 1204 aaKnown RBP16.8■□□□□ 0.28
CALM3-212ENST00000599839 POMKQ9H5K3 350 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 GCNT4Q9P109 453 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
CALM3-212ENST00000599839 CILPO75339 1184 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 FAM163BP0C2L3 166 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 ELF1P32519 619 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 ZNF165P49910 485 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 NTHL1P78549 312 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 ITIH3Q06033 890 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 TWF1Q12792 350 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 CUL2Q13617 745 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 CBX2Q14781 532 aaPredicted RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 IQCB1Q15051 598 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 WDR44Q5JSH3 913 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 CCDC149Q6ZUS6 474 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 DCP1BQ8IZD4 617 aaKnown RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 UBR7Q8N806 425 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 SMG7Q92540 1137 aaKnown RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 SEPT5Q99719 369 aaPredicted RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 ELOVL4Q9GZR5 314 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 CEP72Q9P209 647 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 DPP7Q9UHL4 492 aa16.79■□□□□ 0.28
CALM3-212ENST00000599839 ZNF638Q14966 1978 aaKnown RBP16.79■□□□□ 0.28
CALM3-212ENST00000599839 NRG2O14511 850 aaPredicted RBP16.78■□□□□ 0.28
CALM3-212ENST00000599839 HNRNPA1P09651 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
CALM3-212ENST00000599839 SLC9A1P19634 815 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 CYP2F1P24903 491 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 HOXA9P31269 272 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 PHLDB3Q6NSJ2 640 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 ELMSAN1Q6PJG2 1045 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
CALM3-212ENST00000599839 ACOT1Q86TX2 421 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 MYCBPAPQ8TBZ2 947 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 NT5C1BQ96P26 610 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 NECAB3Q96P71 396 aaPredicted RBP16.78■□□□□ 0.28
CALM3-212ENST00000599839 NAT10Q9H0A0 1025 aaKnown RBP16.78■□□□□ 0.28
CALM3-212ENST00000599839 CYP3A43Q9HB55 503 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 CISHQ9NSE2 258 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 TMEM30AQ9NV96 361 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
CALM3-212ENST00000599839 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
CALM3-212ENST00000599839 CLDN5O00501 218 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 LRG1P02750 347 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 HAPLN1P10915 354 aaPredicted RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 CCDC130P13994 396 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 SP100P23497 879 aaPredicted RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 CACNA2D1P54289 1103 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 NFE2Q16621 373 aaPredicted RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 MGAT5BQ3V5L5 792 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 ZNF394Q53GI3 561 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 SDHAF4Q5VUM1 108 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 DPY19L2P1Q6NXN4 242 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 TRIM65Q6PJ69 517 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 GRASPQ7Z6J2 395 aaPredicted RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 C12orf29Q8N999 325 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 SPPL2BQ8TCT7 592 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 GPR152Q8TDT2 470 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 C2orf15Q8WU43 125 aaKnown RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 KREMEN1Q96MU8 473 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 B3GNT5Q9BYG0 378 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 ZNF518BQ9C0D4 1074 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 VPS16Q9H269 839 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 CBX8Q9HC52 389 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 SIX2Q9NPC8 291 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 DNMT3BQ9UBC3 853 aaKnown RBP16.77■□□□□ 0.28
CALM3-212ENST00000599839 MAFFQ9ULX9 164 aa16.77■□□□□ 0.28
CALM3-212ENST00000599839 MYO16Q9Y6X6 1858 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms